[go: up one dir, main page]
KEGG   Populus trichocarpa (black cottonwood): 7460071
Entry
7460071           CDS       T01077                                 
Name
(RefSeq) transcription factor E2FB isoform X2
  KO
K06620  transcription factor E2F3
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    7460071
Transcription factors [BR:pop03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, E2F
    7460071
SSDB
Motif
Pfam: E2F_CC-MB E2F_TDP GCN5L1 TrmB
Other DBs
NCBI-GeneID: 7460071
NCBI-ProteinID: XP_002312830
UniProt: B9HQ23
Position
9:complement(12485298..12491306)
AA seq 473 aa
MSSSQAPNNQSMKQPQQNSMQSHAPNQCQQHQQLPFSSMKPHFLPPGDYHRFGVDHRRPV
SDHDVEGIVVKPPTLKRKSDAADHQGESSEWNAGHGYMEVVTSPLQTPVSGKGGKTPKTS
RLSKSGKSASQSAAGALGSPGNNVTPTGPIRYDSSLGLLTKKFINLIKHAEDGILDLNKA
ADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSREGDDNNVATLQAEVENL
TIEERRLDEQTREMQERLRDLSVDEKNQKWLFVTKEDIKILPGFQNETLIAIKAPHGTTL
EVPDPDEAVDYPQRRYRIVFRSTMGPIDVYLVSQFEEKFEDIQGAEPPPSDSSTSGFNEN
AATTMVTEESRAKEFEMQEQDGHRICSEPNTSHDFVSGIMKIVPSDVNSDADYWLLSDAD
VSITDMWRNEPVVEWNDLDTLHNDYVMPNFSTPQPQTPSNPTEVPPAANTTAG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgtcgagctcacaagcaccaaacaaccagtcaatgaagcagccgcagcagaatagtatg
cagagtcacgcaccgaatcaatgccagcagcatcagcagcttccgttttcttctatgaag
ccgcattttctgcctcctggtgactaccaccggttcggtgtcgaccatcgacgacccgtt
tctgatcatgatgttgagggcattgttgttaaacctcctacattaaagcggaaaagtgat
gcagcggatcatcaaggtgagtccagtgagtggaatgctggtcatggatatatggaagta
gttaccagccccctccagacacctgtatcaggaaaaggtggaaagacacccaaaacatcg
agactctcaaagagcggtaaatctgcatctcagagtgctgctggagctcttggttctcca
ggaaataatgttactccaactggtccaattcgctatgacagctctctaggtctcttgact
aagaaattcatcaatttgatcaaacatgctgaagacggtatccttgatcttaataaagct
gctgatactttggaggttcaaaagaggcggatatatgatataacaaatgttctagaagga
attggtcttatagaaaagaagctcaagaacagaattcagtggaagggacttgatgtatca
aggtcaagggagggagatgataataatgttgctactttgcaggcagaagttgaaaacctg
accattgaggaacgcagattagatgaacaaacaagagaaatgcaagaaagattgagggac
ctcagtgtagatgaaaaaaatcaaaagtggctttttgtcactaaggaagacatcaagatt
ttacctggcttccagaatgaaaccttgatagcaatcaaagctccacatggtaccactcta
gaagttccagatcctgatgaggcagttgattatccccagaggagatacaggatagtcttc
aggagtacaatgggtccaatagatgtttatcttgtcagtcaatttgaagagaaatttgaa
gatattcaaggtgctgaaccacctccaagcgactcgtcaacctcaggttttaatgaaaat
gccgctactacaatggtcacagaggagagcagagcaaaggagtttgagatgcaagaacaa
gatggtcatagaatctgctcagaacctaacacctcacatgactttgtgagtgggatcatg
aagattgtcccctcggatgttaatagtgatgcagattactggcttttatcagatgctgat
gttagcatcacagacatgtggcgcaacgaacctgtggttgaatggaatgacttggatacg
cttcataatgactatgtcatgccaaatttcagcacaccacaaccccaaactccatctaat
ccaacagaagtgcctcctgctgctaacactactgccgggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system