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KEGG   Cricetulus griseus (Chinese hamster): 100751370
Entry
100751370         CDS       T02813                                 
Symbol
Scn9a
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
  KO
K04841  voltage-gated sodium channel type IX alpha
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:cge00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    100751370 (Scn9a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cge04040]
    100751370 (Scn9a)
Ion channels [BR:cge04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100751370 (Scn9a)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ Lustrin_cystein
Other DBs
NCBI-GeneID: 100751370
NCBI-ProteinID: XP_027276063
UniProt: A0A8C2ME43
Position
6:108503709..108586164
AA seq 1985 aa
MAMLPPPGPQSFVYFTKQSLALIEQRISEEKAKEHKDEKKEDDEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKELEDNETLESIMNTVESEEELK
KYFYYLEGTKDALLCGFSTDSGQCPEGYECVKAGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLDRLKKEQEEAEAIAAAAAEYTSIGRSRMMGLSESSSETSRLSSKSAKERRNRR
KKKNQKKISSGEEKGDDEKLSKSESEESIRKKSFHLGVEGHHRAREKRLSTPNQSPLSIR
GSLFSARRSSRTSLFSFKGRGRDLGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSS
NISQASRSPQMLSVNGKMHSAVDCNGVVSLVDGPSALMVPNGQLLPEVIIDKATSDDSGT
TNQMRKKRLSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHT
FLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLAVGN
LIFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIN
EDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVL
NLFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKRTLRELILKSFSKKPKG
SKDTKRTVDPNNKKENYIANRTLAEMSKDHKERDKMSAFGSSIDKSFMDENDYQSFIHNP
SLTVTVPIAPGESDLENMNTEELSSDSDSDYSKERRNRSSSSECSTVDNPLPGEGEEAEA
ESVNADEPEACFTDGCVRRFPCCQVNVDSGKGKVWWTIRKTCYRIVEHSWFESFIVLMIL
LSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWLDF
LIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGTRFPTTQVANRSECFALMNVTGDVRWK
NLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNEQPKYEYNLYMYIYFVIFIIF
GSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNK
FQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQSRYMTDVLYWINMVFIILFTGECV
LKLISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRL
IKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFET
FGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKIHPGSSVEGDCGNPSVGIFYFVSY
IIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCKLS
DFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQM
EDRFMSANPSKVSYEPITTTLKRKQEDVSATIIQRAYRRYRLRQNVKNISSIYIKDGDRD
DDLPNKEDIVFDNVNENSSPEKTDATASAISPPSYDSVTKPDQEKYETDKTEKEDKGKDG
KESRE
NT seq 5958 nt   +upstreamnt  +downstreamnt
atggcgatgctgcctcctccaggacctcagagctttgtctacttcacaaaacagtctctt
gcccttattgagcaacgcatttctgaagaaaaagccaaggaacacaaagatgaaaagaaa
gaagatgatgaagaaggtcccaagcccagcagtgacttggaagctggcaaacagctgccc
ttcatctatggagacattccccctgggatggtgtcggagcccctggaggacctggaccca
tactatgcagacaagaaaacttttatagtattgaacaaagggaaagcaatcttccgtttc
aacgccactcctgctttgtacatgctgtcccccttcagtccgctaagaagaatatctatt
aagattttagtgcattctttattcagcatgctgatcatgtgcaccattctgacaaactgc
atattcatgaccatgagcaaccctccagaatggaccaaaaatgtggaatacacttttact
gggatatatacttttgaatcactcataaaaatccttgcaagaggcttttgcgtgggagaa
ttcaccttcctccgtgacccttggaactggctggattttattgtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaatcccaggcctgaagaccatcgtgggggccctgatccag
tctgtgaaaaagctgtctgatgtcatgatcctcactgtgttctgtctcagtgtctttgca
ttaattggactacagctgttcatgggaaacctgaagcataaatgtttcaggaaggaactg
gaagacaatgaaacattagaaagcatcatgaatactgttgagagtgaagaggaactgaaa
aaatatttttattacttggagggaaccaaagatgctctcctttgtggtttcagcacagat
tctggtcagtgtccagaagggtatgagtgtgtgaaggctggcagaaaccctgattatggc
tacacaagctttgacactttcagctgggccttcttagccttgtttcggctaatgactcaa
gactactgggagaacctttaccaacagactttacgtgctgctggcaaaacctacatgatt
ttctttgtcgtggtgattttcctgggctccttttacctgataaacctgatcctggctgtg
gtagccatggcatatgaagagcagaaccaggccaacattgaagaagcaaaacagaaagaa
ttagaatttcagcagatgttagaccgactcaaaaaagagcaggaagaagctgaggcgatc
gctgcagctgctgctgaatacactagtattgggcggagcaggatgatgggtctctcggag
agttcttcagaaacctccaggctgagctcaaagagtgccaaggagagaagaaacagaagg
aagaaaaagaaccagaagaagatctccagtggcgaagaaaagggcgatgatgaaaaactg
tccaagtcagagtcagaggaaagcatccgaaagaaaagtttccatctcggtgtagaagga
caccaccgcgcccgggagaagaggctgtccacacctaaccagtcacccctcagcattcgc
ggctccttgttttccgcaaggcgcagcagcagaacgagtctcttcagttttaagggtcga
ggaagagatctaggatctgagaccgaattcgctgatgatgagcatagcatttttggagac
aatgagagcagacgaggttcactatttgtgcctcacagaccccgggagcgacgcagcagt
aacatcagccaggccagtaggtccccccaaatgctgtcggtgaacgggaagatgcacagt
gcggtggactgcaatggcgtggtgtcgcttgttgatggaccctcagccctcatggtcccc
aatggacagcttcttccagaggtgataatagataaggcaacttccgacgacagcggtaca
accaatcaaatgcgcaaaaaaagactctccagttcttacttcctgtctgaggacatgttg
aatgacccgcatctcaggcaaagagcaatgagcagagcaagcattctgactaatactgtg
gaagaacttgaagaatctagacaaaaatgtccaccttggtggtacagatttgctcacaca
tttttaatctggaattgttctccatattggataaaattcaaaaagttcatctattttatt
gtaatggatccttttgtagatcttgcaattactatttgcatagttctaaacacgttgttt
atggctatggagcaccacccaatgactgatgagttcaaaaatgtacttgctgtggggaac
ctgatatttacagggatcttcgcagctgaaatggtactgaagttaatagccatggatcct
tatgagtattttcaagtagggtggaatatttttgacagcctaattgtaacattaagtttg
gtagagcttttcctagcagatgtggaaggattatcagtcctgcggtcattcagattgctg
cgagtcttcaaattggcaaaatcctggcccacactgaatatgctcattaagatcattggc
aattcggtgggcgcactgggaaacctgaccctggtgttggccatcattgtcttcattttt
gccgtggtcggcatgcagctgtttggaaaaagctacaaggagtgtgtctgtaaaatcaat
gaggattgcaagctcccgcgctggcacatgaatgacttcttccattccttcctgatcgtg
ttccgagtgttgtgtggagaatggatagagaccatgtgggactgcatggaggttgctggc
caagcaatgtgccttattgtttacatgatggtcatggtgattggtaaccttgtggtcctg
aacctgtttctggctttattactgagttcatttagttctgacaatcttacagcaattgaa
gaagacaccgatgcaaacaacctgcagattgcagtggccagaattaaaagaggaataaat
tatgtaaaacggacattacgtgaacttatcctaaaatcattttccaaaaagccaaagggc
tccaaggatacaaaacgaacagtagatccaaacaacaaaaaagaaaactatatcgcaaac
cgtacacttgctgagatgagcaaagatcacaaagagagggataaaatgagtgcctttggg
agcagtatagacaaaagttttatggatgaaaatgattaccagtcctttattcataatccc
agcctcacggtgacagtgccaattgcacctggggaatctgatttggaaaatatgaacact
gaagaacttagtagtgactcagatagcgactacagcaaagagagacggaaccgatcaagt
tcctcggagtgtagcacagttgataaccctctgccgggagaaggagaagaagcagaagct
gagtctgtgaatgcggatgagccagaagcatgttttacagacggttgtgtgcggagattt
ccatgctgccaagttaatgtagactccgggaaagggaaagtctggtggaccatcaggaag
acctgctacaggatagttgaacacagctggtttgaaagctttattgttctgatgatcctg
ctcagcagcggagctctggcttttgaagatatatacattgaaaagaaaaagaccattaaa
attattctggagtatgccgacaagatatttacctacatcttcattttggaaatgcttcta
aaatgggtggcctatgggtataaaacatatttcaccaatgcctggtgttggctggacttc
ttaattgttgatgtatctctggttactttagtagccaacactcttggctactcagacctt
ggtcccattaaatccctgcgaaccttgagagcactaagacctctaagagctttgtctaga
tttgaaggaatgagggtggtggtcaatgcactcataggagcaatcccttccatcatgaat
gtgcttcttgtgtgtcttatattctggctaatatttagcatcatgggtgtcaatctgttt
gctggcaagttctatgagtgtgtcaacactaccgatgggacacgatttcctacaactcaa
gttgcaaaccgttctgagtgttttgcccttatgaatgttactggagatgtacgatggaaa
aatctgaaagtgaacttcgataatgttgggctcggttatctgtcgctgcttcaagtcgca
acatttaaaggctggatggacattatgtatgcagctgttgactctgttaatgtaaatgag
cagccgaaatatgagtacaacctctacatgtatatttattttgtcatctttatcatcttt
gggtcattcttcactttgaacttgttcattggtgtcatcatagacaatttcaaccaacag
aaaaagaagcttggaggtcaagacatctttatgacagaagaacagaagaaatattataat
gcaatgaagaagctgggatccaagaaaccacaaaaaccaattcctagaccagggaacaaa
ttccaaggatgtatatttgacttagtgacaaatcaagcttttgatatcactatcatggtt
cttatttgtctcaacatggtaaccatgatggtggaaaaagaagggcaaagtcggtacatg
actgatgttttgtattggatcaatatggtcttcattatcctgttcactggggagtgcgtg
ctgaagttgatctccctcagacattactacttcactgttggatggaacatctttgatttt
gtggtagtgatcctctccattgtaggaatgtttctcgctgagatgatagagaagtacttt
gtgtcccctaccctgttccgagtcatccgcctggccaggattggccgaatcctacgcctg
atcaaaggcgccaaggggatccgtacactgctttttgctttgatgatgtctcttcccgca
ctgttcaacatcggcctcctgcttttcctggtcatgttcatctacgccatctttgggatg
tccaactttgcctatgttaaaaaggaagctggaattaatgacatgttcaactttgagact
tttggcaacagcatgatctgcctgttccaaatcaccacctctgcaggctgggatggactg
ctggcccccatcctcaacagtgcccctcccgactgtgacccaaaaaaaattcatccagga
agttcagtggaaggagactgtgggaacccgtctgtggggattttctactttgtcagctac
atcatcatatccttcctggttgtggtgaacatgtacatcgctgtcatcctggagaatttc
agcgttgccactgaagaaagtactgaacccctgagtgaggacgactttgagatgttctat
gaggtctgggagaagttcgaccctgatgccactcagttcatagagttctgcaagctgtct
gactttgcggctgccctggatcctccccttctcatcgcaaagccaaacaaagtccagctc
attgccatggatctgcccatggtgagcggagaccgcatccactgcctggacatcttattt
gcttttacaaagcgtgtccttggtgagagtggagagatggattctcttcgttcacagatg
gaagataggtttatgtctgcaaatccttctaaagtgtcctatgagcccattacaaccaca
ctaaaacgaaaacaagaggatgtatctgctactatcattcagcgtgcttacagaaggtac
cgccttcggcaaaacgtcaagaatatatcaagtatatacataaaagatggagatagggat
gatgacttgcccaataaagaagatatagttttcgataatgttaacgagaactcaagtcca
gaaaagacagatgcaactgcctctgccatctctccgccttcgtatgacagtgtcacaaag
ccagatcaagagaaatatgaaacagacaaaacagagaaggaagacaaagggaaagatggg
aaagaaagcagggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (7)   
   Pfam (7)   
All databases (49)   

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