KEGG T07554: 122453742

Cervus canadensis (wapiti): 122453742

Entry

122453742         CDS       T07554

Symbol

SCN9A

Name

(RefSeq) sodium channel protein type 9 subunit alpha

K04841

voltage-gated sodium channel type IX alpha

Organism

ccad Cervus canadensis (wapiti)

Pathway

ccad04742

Taste transduction

Brite

KEGG Orthology (KO) [BR:ccad00001]
09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    122453742 (SCN9A)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ccad04040]
    122453742 (SCN9A)
Ion channels [BR:ccad04040]
Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   122453742 (SCN9A)

SSDB

Motif

Pfam:

Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ Lustrin_cystein DUF6739

Other DBs

NCBI-GeneID:

122453742

NCBI-ProteinID:

XP_043343838

Position

15:complement(46253395..46417963)

AA seq 1987 aa
MAMLPPPGPQSFVFFTKQSLALIEQRIAEGKAKEPKEEKKDDDEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHAAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCVQTSLENNETIENILDTLDEEEYAK
YFYYLEGSKDALLCGFSTDSGQCPEGYTCRKIGRNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKEF
EFQQMLDRLKKEQEEAEAIALAAAEYTSIGRSRIMGLSESSSETSKLSSKSAKERRNRRK
KKNQKKLSSGEEKGDDEKLSKSESEESIRRKSFHLGVEGHRRAREKRLSTPNQSPLSIRG
SLFSARRSSRTSLFSFKGRGRDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPVLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTT
HQIHKKRRHSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLAVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINE
NCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKKGINYVKRTLREFVLKAFSKKPKIS
KEIRQTEDLNFKKENYISNRTLAEMGKDHNFHKEKDKTSGFGKSVDKYLMEESDGQSFIH
NPSLTVTVPIAPGESDLEVMNTEELSSDSDSEYSKGRLNQWSSSECSTVDNPVPGEGEEA
EAEPVNSDEPEACFTDGCVQRFPCCQVNIESGKGKIWWNIRKTCFRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPTSEVENRSACLALMNVSQNVR
WKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDKQPIYEYNLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSEYMTEVLYWINVVFIILFSGE
FVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSK
LSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRS
QMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGD
RDDDLPNKEDMVFDNVNENSSLEKTDATPSTVSPPSYDSVTKPDKEKYEKDKTEKEDKGK
DGKEGKK

NT seq 5964 nt +upstreamnt +downstreamnt
atggcaatgttgcctcccccgggacctcagagctttgtcttcttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaagcaaaggaacccaaagaagaaaagaaa
gatgatgacgaagaagggccaaagccaagcagtgacttggaagccggcaaacagctgccc
ttcatctatggggacattcctccgggcatggtgtcagagcccctggaggacttggaccct
tactatgcagacaaaaaaactttcatagtgttgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatgctgtctcctttcagtcctctcagaagaatatctatt
aagattttagtacatgctgcattcagcatgcttatcatgtgcactattctgacgaactgc
atatttatgaccatgagtaatcctccagactggaccaagaatgtagagtacacttttact
ggaatatatacttttgagtcacttgtgaaaatccttgcaagaggattctgtgtaggagaa
ttcacttttcttcgtgacccatggaactggcttgatttcatagtcattgtctttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtgttgaga
gctttgaaaactatttctgtaatcccaggcctgaaaaccatcgtgggggccctgatccag
tctgtgaaaaagctctcagatgtcatgatcctgactgtgttctgtctgagcgtgtttgcc
ctgattgggctgcagctctttatgggcaacctgaagcataaatgtgtacagacttcactt
gaaaacaatgaaacaatagaaaacatattggataccctcgatgaagaagaatatgcaaaa
tatttttattacttggagggatccaaagatgctctcctttgtggtttcagcaccgattca
ggtcagtgtccagaagggtacacctgtaggaagattggcagaaatcctgactatggctac
acgagcttcgacactttcagctgggccttcttagccttgtttcggctaatgacgcaggat
tactgggaaaacctttaccaacagaccctccgtgctgctgggaaaacctacatgatcttc
tttgttgtggtgattttcctgggatccttttatctaataaacttgatcttggctgtcgtt
gccatggcctatgaagaacagaaccaggcaaacattgaagaagcgaggcagaaagagttc
gaatttcaacagatgctagatcgacttaaaaaagagcaagaggaagctgaggcaatagca
ttagcagcagctgaatataccagcattgggagaagcagaataatgggtctctctgagagt
tcttctgagacatccaaactgagctctaaaagtgctaaagaaagaagaaacaggagaaag
aaaaagaaccaaaagaaactctccagtggggaagaaaagggagatgatgagaaactgtcc
aaatcagaatctgaggagagcatcaggagaaaaagtttccaccttggtgttgaaggtcat
aggcgagcacgtgaaaaaagattgtctacccctaaccagtcaccactcagcatccgcggc
tccttgttttctgcaaggcggagcagcagaacgagtcttttcagcttcaaaggtcgagga
agagatattggatctgagactgaatttgccgacgacgaacacagcatctttggcgacaac
gagagcagaaggggctccctgtttgtgccccacagacctcgggagcggcgcagcagtaac
atcagccaggccagtaggtctcccccagtgctgccagtgaatgggaagatgcacagcgcc
gtcgactgcaatggcgtggtctccctggtggatggaccctccgccctcatgctccccaat
ggacagctcctgccagaggtgataatagataaggcaacttctgatgacagcggtacaacc
catcaaatacacaagaaaagacgtcacagttcttacctcctttctgaggatatgttgaat
gaccccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacactgtagaa
gaacttgaggagtccagacagaaatgtccaccttggtggtacagatttgcacacacattc
ttgatctggaattgctctccatattggataaaattcaaaaaatgtatctattttattgta
atggatccttttgtagatcttgctattactatttgcatagttttaaacacactgttcatg
gctatggaacatcacccaatgactgaggaattcaaaaatgtgctcgctgtgggaaatttg
gtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggatccatat
gagtatttccaagtaggatggaatatttttgatagtcttattgtgaccttaagcttagtg
gaactttttctagcagatgtggaaggattgtcagttctacgatcattcagactgctccga
gttttcaagttagcaaagtcttggccaacactgaacatgctgatcaagatcattggcaat
tcagtgggggctctgggaaacctaaccttggtgttggccatcatcgtcttcatttttgct
gtggttggcatgcagctctttggtaagagctacaaagaatgtgtctgcaagatcaatgaa
aactgcaaactcccccgctggcacatgaatgacttcttccactccttcctgattgtgttc
cgggtgctgtgtggagagtggatagagaccatgtgggactgcatggaggttgctggtcaa
gccatgtgcctcattgtttacatgatggtcatggtcattggaaacctggtggtcctcaac
ctatttcttgctttattactgagctcatttagttcagacaatcttacagcaattgaagaa
gacactgatgcaaacaacctccagattgcagtggccagaattaagaagggaataaattat
gtgaaacgaaccttacgtgagtttgttctaaaagcattttccaaaaagccaaagatttcc
aaagagataagacaaacagaagatctaaattttaaaaaggaaaactacatctcgaaccgc
acacttgctgaaatgggcaaggatcacaatttccacaaagaaaaagataaaaccagtggt
tttggaaagagcgtggacaaatacttaatggaagaaagtgatggtcaatcatttattcat
aatcccagcctcacagtaacagtgccaattgcacctggggagtctgatttggaggttatg
aacactgaggagcttagcagtgattcagatagcgaatacagcaaggggaggctgaaccag
tggagttcctcagagtgcagcacagttgataaccctgtgcctggagaaggagaagaggca
gaggccgagcctgtgaattcagatgagccagaggcctgttttacagatggttgtgtacag
aggttcccgtgctgccaagttaacatagaatcagggaaaggaaaaatctggtggaacatc
aggaaaacctgcttcaggatagttgagcacagttggtttgaaagcttcattgttctcatg
atcttgctcagcagtggtgctctggcttttgaagatatatatattgaaaagaaaaagacc
attaagattatcctggagtatgctgataagatattcacttatatcttcattctggaaatg
cttctaaaatgggtagcatatggttacaaaacctatttcaccaatgcctggtgttggctg
gatttcttgattgtcgatgtttctttggttacattagttgcaaatactcttggctactca
gatcttggtcccattaaatcccttcggacacttagagctttaagacctctgagagcttta
tctagatttgaaggaatgagggtagttgtgaatgcactcattggtgcaattccttctatc
atgaatgtgctacttgtgtgtctcatattctggctgatatttagcatcatgggagtaaat
ttgtttgctggcaagttttatgagtgtattaacaccacagatggatcgcggtttcctaca
agtgaagttgaaaatcgttctgcctgtcttgcgcttatgaatgttagtcaaaatgtgcgg
tggaaaaacctgaaagtgaactttgataatgttggacttggttacctgtctctgcttcaa
gttgcaacatttaagggatggatggatattatgtatgcagcagttgattctgttaacgta
gacaagcagcccatttatgaatacaacctctacatgtatatttattttgtcatcttcatc
atcttcgggtcattcttcactttgaacttgttcattggtgtcatcatagataatttcaac
caacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatat
tataatgcgatgaaaaagctgggatccaagaaaccacaaaagccaatacctcggccaggg
aacaaattccaaggatgtatctttgacctcgtaacaaaccaagcttttgatatagccatc
atggttctgatctgcctcaacatggtaaccatgatggtagaaaaagagggacaaagtgaa
tacatgactgaagttttatattggatcaatgtggtttttattatcctgttctctggagaa
tttgtgctgaaactgatctccctcagatgctactacttcactgtaggatggaacatcttt
gattttgtggttgtaattctctccattgtaggtatgtttctagcagatttgatagaaagg
tattttgtgtcccctaccctattccgagtgatccgtcttgccaggattggccgaatcctg
cgtctgatcaaaggggccaagggaatccgcacactgctctttgctttgatgatgtccctt
cctgcattgtttaacatcggccttctgctcttcctggtcatgttcatctatgccatcttt
ggaatgtccaattttgcctatgttaaaaaggaagctggaattaatgacatgttcaacttt
gagacctttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggat
ggattgctagcacctatcctcaacagtgcaccaccggactgtgaccccaaaaaagttcat
cctggaagctcagttgaaggagactgtgggaacccgtctgttgggatattctattttgtc
agttacatcatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctggag
aacttcagtgttgctactgaagaaagtactgagcccctgagtgaggacgattttgagatg
ttctatgaggtttgggagaagtttgatccagatgccacccaatttatagaatatagcaaa
ctctctgattttgcagcggccctggatcctcctcttctcatagccaaaccaaacaaagtc
cagctcattgccatggacctgcccatggtcagtggggacaggatccactgccttgacatc
ttatttgcttttacaaagcgtgttttgggggaaggtggagagatggactctcttcgttca
cagatggaagaaaggttcatgtctgcaaatccttctaaagtgtcttatgagcccatcaca
actacactaaaaagaaagcaagaggatgtgtctgctacagtcattcaacgtgcttacaga
cgttaccgcttacgacaaaatgtcaaaaatatatcaagtatatacatcaaagatggtgac
agagatgatgatttgcccaataaagaagatatggtttttgataatgttaatgagaactca
agtctagaaaaaacagatgcaactccatccactgtctctccaccttcatatgatagtgta
acaaaaccagacaaagagaaatatgaaaaagacaaaacagaaaaggaagacaaagggaaa
gatggcaaggaaggcaaaaaatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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