KEGG T08817: 117703342

Arvicanthis niloticus (African grass rat): 117703342

Entry

117703342         CDS       T08817

Symbol

Scn9a

Name

(RefSeq) sodium channel protein type 9 subunit alpha isoform X1

K04841

voltage-gated sodium channel type IX alpha

Organism

anu Arvicanthis niloticus (African grass rat)

Pathway

anu04742

Taste transduction

Brite

KEGG Orthology (KO) [BR:anu00001]
09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    117703342 (Scn9a)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:anu04040]
    117703342 (Scn9a)
Ion channels [BR:anu04040]
Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   117703342 (Scn9a)

SSDB

Motif

Pfam:

Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ Lustrin_cystein DUF6739

Other DBs

NCBI-GeneID:

117703342

NCBI-ProteinID:

XP_034350750

Position

2:complement(42254438..42397430)

AA seq 1985 aa
MAMLPPPGPQSFVRFTKQSLALIEQRISEEKAKGHKDEKKDDEEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHSFFSMLIMCTILTNCIFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCLRKEFEDNETMKSILNTVESEEELK
KYFYYLEGSKDALLCGFSTDSGQCPEGYTCIKLGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLERLKKEQEEAEAIAAAAAEYTSIGRSRIMGLSESSSETSRLSSKSAKERRNRR
KKKNQKKMSSGEEKGDDEKLSKSGSEESIRKKSFHLGVEGHHRTREKRLSTPNQSPLSIR
GSLFSARRSSRTSLFSFKGRGRDLGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSS
NISQASRSPPVLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGT
TNQMRKKRLSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHT
FLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLAVGN
LIFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIN
EDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVYMMVMVIGNLVVL
NLFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKQTLREFVLNSFSKKPKG
SKDTKRTADPSNKKENYISNRTLAEMSKDHNFLKEKERVSGFGSSLDKSFMDENDYQSFI
HNPSLTVTVPIAPGESDLENMNTEELSSDSDSDYSKERRNRSSSSECSTIDNPLPGEEEA
EAEPVNADEPEACFTDGCVRRFPCCQVNVDSGKGKVWWTIRKTCYRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGSRFSTSQVANSSECFALMNVSGNVR
WKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNEQPKYEYNLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQTEYMNYILYWINVVFIILFTGE
CVLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCK
LSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRS
QMEERFMSANPSKVSYEPITTTLKRKQEDVSATIIQRAYRRYRLRQNVKNISSIYIKDGD
RDDDLPSKEDIVFDNVNENSSPEKTDATASTVSPPSYDSVTKPDQEKYETDKTEKEDKEK
DESRK

NT seq 5958 nt +upstreamnt +downstreamnt
atggcgatgctgcctcctccaggacctcagagcttcgttcgcttcacaaaacagtccctt
gccctcattgagcaacgcatttctgaagaaaaagccaagggacacaaagatgaaaagaaa
gatgacgaggaagaaggtcccaagcccagtagtgacttggaagctggtaaacagctaccc
ttcatctatggagacattcccccgggaatggtgtcagagcccctggaggacctggatcca
tactatgcagacaaaaaaacttttatagtattgaacaaagggaaagcaatcttccgtttc
aatgccacccctgctttgtacatgctgtcacccttcagtcctctaagaagaatatctatt
aagatcttagtgcactccttcttcagcatgcttatcatgtgcacaattctgacgaactgc
atattcatgaccatgagcaaccctccagaatggaccaaaaatgtagagtacacttttact
gggatatatacttttgaatcactcataaaaatccttgcaagaggcttttgcgtgggcgaa
ttcaccttcctccgtgacccttggaactggctggactttgttgtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaatcccaggactaaagaccatcgtgggggccctgatccag
tcagtaaagaagctctctgatgtcatgatcctcactgtcttctgtctcagtgtctttgca
ctaattgggctacagctttttatgggcaacttgaagcataaatgtctcaggaaggaattt
gaagataatgaaacaatgaaaagcatcttgaatactgttgaaagtgaagaagaactgaaa
aagtatttttattacttggagggatccaaggatgctcttctttgcggtttcagcacagat
tcagggcagtgtccagaagggtacacctgtataaagcttggcagaaacccagattatggc
tacacaagctttgacacattcagctgggccttcttggcattgtttcggctaatgactcaa
gactactgggagaacctttaccaacagactctgcgtgctgctggcaaaacctacatgatt
ttctttgtcgtggtgatttttctgggctccttttacctgataaacttgatcctggctgtc
gtagccatggcgtatgaggaacagaaccaggccaacatcgaagaagctaaacagaaagag
ttagagtttcagcagatgttagaacgactaaaaaaagagcaggaagaagctgaggcgatc
gctgcagccgctgctgagtacacgagtatagggcggagcaggattatggggctctctgag
agctcttcagaaacctccaggctgagttcaaagagtgccaaggaaagaagaaaccgaagg
aaaaaaaagaaccagaagaagatgtccagtggcgaggaaaagggtgacgatgagaagctg
tccaagtcaggatcagaggaaagcatccgaaagaaaagcttccatctcggcgtggaagga
caccaccggacccgggaaaagagactgtccacccctaaccagtctccactcagcattcgc
gggtccttgttttctgccaggcgcagcagcagaacgagtctcttcagttttaaggggcga
ggaagagatctgggatctgagacagaattcgctgacgatgagcatagcatttttggagac
aatgagagcagaaggggttcactattcgtaccccatagaccccgggaacggcgcagcagt
aacatcagccaggccagtaggtccccaccagtgctgccggtgaacggaaagatgcacagt
gcagtggactgcaatggcgtggtgtcgcttgttgatggaccctcagccctcatgctcccc
aatggacagcttcttccagaggtgataatagataaggcaacttctgacgacagcggaaca
actaatcagatgcgcaaaaaaagactctctagttcttactttttgtctgaggacatgctg
aatgacccacatctcaggcaaagagcaatgagcagagcgagtattctaaccaacactgta
gaagaacttgaagaatctagacaaaaatgtccaccatggtggtacagatttgctcacacc
tttttaatctggaattgctctccatattggataaaattcaaaaagctcatctattttatt
gtaatggatccttttgtagatcttgcaattaccatttgcatagttttaaacaccttattt
atggctatggagcaccatccaatgactgatgaattcaaaaatgtactcgcagtggggaac
ctgatcttcacagggatcttcgcagctgaaatggtactgaagttaatagccatggatccc
tacgaatatttccaagtaggatggaatatttttgacagcctgattgtgacgttgagtttg
gtagagcttttcctagcagatgtggaaggattatcagtcctgcggtcattcagattgctg
cgagtcttcaagttggcaaaatcctggcccacactgaatatgctcattaagatcatcggg
aactcggtgggcgcactgggcaacctgaccctggtgttggccatcatcgtcttcattttt
gccgtggtcggcatgcagctgtttggaaagagctacaaggagtgtgtctgcaagatcaac
gaggactgcacgctgccgcgctggcacatgcacgacttcttccattccttcctgatcgtg
ttccgtgtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgcgggc
cagaccatgtgccttattgtttacatgatggtcatggtgattgggaaccttgtggtcctg
aacctgtttctggctttattactgagttcctttagttctgacaatcttacagcaattgaa
gaagacaccgatgcaaacaacctccagattgcggtggccaggattaaaagaggaataaat
tatgtgaaacagaccctgcgtgaattcgttctaaattcattttccaagaagccaaagggt
tccaaggacacaaaacgaacagcggatcctagcaacaaaaaagaaaactatatctcaaac
cgtacccttgctgagatgagcaaagatcacaatttcctcaaagaaaaggaaagagtcagt
ggttttggcagcagtctagacaaaagctttatggatgaaaatgattaccagtcctttatt
cataatcccagtctcacagtgacagtgccaattgcacctggggagtctgatttggaaaat
atgaacacagaagaacttagcagtgactcagatagtgactacagcaaagagagacggaac
cgatcaagttcttctgagtgcagcaccattgataaccctctgccaggagaagaggaggca
gaagccgagcctgtaaatgcagatgaacctgaagcctgttttacagatggttgtgtgcgg
agatttccatgctgccaagttaatgtagactctggaaaagggaaagtttggtggacaatc
aggaagacctgctaccggatagttgaacacagctggtttgaaagcttcattgttctcatg
attctgctgagcagcggagctctggcttttgaagatatatatattgaaaagaaaaagacc
attaagattatcctggagtatgctgacaagatattcacctacatctttattctggaaatg
cttttaaaatgggtggcatatgggtataaaacatatttcactaatgcctggtgttggctg
gacttcttaattgttgatgtgtctttagttactttagtagccaacactcttggctactca
gatcttggccccattaaatctctacgaacactgagggccctaagacccctaagagccttg
tctagatttgaaggaatgagggtagtggtcaacgcactcataggtgcaatcccttccatc
atgaatgtgcttcttgtgtgccttatattctggctaatatttagcatcatgggagtcaat
ctgtttgctggcaagttctatgagtgtgttaacaccacagatgggtcacgattttctaca
tctcaagtagcaaacagttctgagtgttttgccctgatgaatgttagtggaaatgtgcga
tggaaaaacctgaaagtaaacttcgataacgttgggcttggttacctgtcgttgcttcaa
gttgcaacattcaaggggtggatggatattatgtatgcagcagttgactctgttaatgta
aatgaacagccaaaatatgaatacaacctctacatgtacatttactttgtcatctttatt
atttttggctccttcttcactttgaacttgttcattggtgtcatcatagataatttcaac
caacagaaaaagaagcttggaggtcaagatatttttatgacagaagaacagaagaaatac
tataatgcaatgaagaagctggggtccaagaaaccacaaaaaccaattccaaggccaggg
aacaaattccaaggatgtatatttgacttagtgacaaaccaagcttttgatatcaccata
atggttcttatatgcctcaacatggtaaccatgatggtagaaaaagaggggcaaactgag
tacatgaattatattttatactggatcaacgtggtcttcattatcctgttcactggggag
tgtgtgctgaagctgatctccctcaggcattactacttcactgtgggatggaacattttt
gattttgtggtagtgatcctctccattgtaggaatgtttcttgctgagatgatagagaag
tattttgtgtcccctaccctgttccgagtcatccgcctagccaggattggacgaatccta
cgactgatcaaaggcgccaaggggatccgcacactgctctttgctcttatgatgtcactt
cctgccctgttcaacatcggcctcctgcttttcctggtcatgttcatctacgccatcttt
gggatgtccaactttgcctacgttaaaaaggaagctggaattaatgacatgttcaacttt
gagacctttggcaacagcatgatctgcctgttccaaatcaccacctctgcaggctgggat
ggacttttggcccccatcctcaacagcgcacctcctgattgtgaccccaaaaaagtccac
ccaggaagttcagtggaaggggactgtggaaatccatctgtgggaattttctactttgtc
agctacatcatcatatccttcctggttgtggtgaacatgtacatcgctgtcatcctggag
aacttcagcgttgccactgaagaaagtactgagcccctgagcgaggacgactttgagatg
ttctatgaggtctgggagaagttcgaccctgatgccactcagttcatagagttctgcaag
ctctctgactttgcagctgccctggatcctcccctcctcatcgcaaagccaaacaaagtc
cagctcattgccatggacctgcccatggtgagtggagaccgcatccactgcctggacatc
ttatttgcttttacaaagcgggtcctgggtgagagcggagagatggattctcttcgttca
cagatggaagaaaggtttatgtcagccaatccttctaaagtgtcctatgaacccatcaca
accacactgaagcgaaaacaagaggatgtatctgcgactatcattcagcgtgcttacaga
cggtaccgccttaggcaaaacgtcaagaatatatcaagtatatacataaaagatggagat
agggatgatgatttgcccagtaaagaagatatagtttttgataatgttaatgagaactca
agtccagaaaagacagatgcaactgcctctaccgtctctccaccttcctatgacagtgtc
acaaagccagatcaagagaaatatgaaacagacaaaacagaaaaggaagacaaagagaaa
gatgaaagcaggaaatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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