LETTER
doi:10.1038/nature10855
Preservation of organic matter in sediments
promoted by iron
Karine Lalonde1, Alfonso Mucci2, Alexandre Ouellet1 & Yves Gélinas1
The biogeochemical cycles of iron and organic carbon are strongly
interlinked. In oceanic waters, organic ligands have been shown to
control the concentration of dissolved iron1. In soils, solid iron
phases shelter and preserve organic carbon2, but the role of iron
in the preservation of organic matter in sediments has not been
clearly established. Here we use an iron reduction method previously applied to soils3 to determine the amount of organic carbon
associated with reactive iron phases in sediments of various
mineralogies collected from a wide range of depositional environments. Our findings suggest that 21.5 6 8.6 per cent of the organic
carbon in sediments is directly bound to reactive iron phases. We
further estimate that a global mass of (19–45) 3 1015 grams of
organic carbon is preserved in surface marine sediments as a result
of its association with iron4. We propose that these associations
between organic carbon and iron, which are formed primarily
through co-precipitation and/or direct chelation, promote the
preservation of organic carbon in sediments. Because reactive
iron phases are metastable over geological timescales, we suggest
that they serve as an efficient ‘rusty sink’ for organic carbon,
acting as a key factor in the long-term storage of organic carbon
and thus contributing to the global cycles of carbon, oxygen and
sulphur5.
Evidence of interactions between iron and organic carbon in marine
sediments was reported nearly 40 yr ago, where concentrations of iron
and organic carbon were found to co-vary6. Because both iron and
organic carbon are commonly associated with clay mineral surfaces, it
was simply stated that ‘‘where there is more deposited fine-grained
material with high surface area for adsorption, we find more organic
matter and more Fe’’6. It is still not clear whether this correlation stems
from the strong affinity of both species for solid surfaces or whether it
reflects enhanced preservation of organic carbon by iron. Iron’s preservative effect on organic matter was previously demonstrated in
laboratory studies7,8, which reported that the presence of iron-rich
solid substrates or the formation of organoferric complexes hampers
microbial degradation of simple organic compounds. Iron also imparts
a protective effect to organic carbon in soil systems2, but this preservation mechanism has never been explored in sediments.
In modern sediments, reactive iron phases (defined here as the solid
iron phases that are reductively dissolved by sodium dithionite) are
typically found as nanospheres of goethite ,10 nm in diameter9,10.
These phases accumulate or are formed within the oxic sediment layer
through oxidation and precipitation of dissolved iron(II) produced
during weathering and diagenetic recycling within the sediment11.
Over time, reactive iron phases become more crystalline, resulting in
reduced surface area, reactivity and solubility. Crystallization is,
however, hindered by the active diagenetic recycling of iron12 and by
coating of iron phases by organic matter13. Accordingly, reactive iron
phases have been shown to survive in sediments for hundreds of
thousands of years14.
We examined sediments collected from a wide range of environments, including fresh waters, estuaries, river deltas, continental margins
and the deep sea and encompassing various depositional environments
and mineralogies. These samples include organic-carbon-rich, sulphidic
Black Sea sediments and organic-carbon-rich sediments from dioxygendeficient zones along the Indian and Mexican (sampling station 306)
margins. Also included are sediments from the Arabian Sea, the Saanish
Inlet and a boreal lake (Lake Brock), which have a productivity-driven
seasonal pattern of dioxygen-deficient waters. Estuarine, deltaic and
margin deposits accumulating below well-oxygenated waters of the
Arctic margin, the St Lawrence estuary and gulf, the Mexican margin
(stations 303–305), the Eel River basin, the Washington coast and the
adjacent Columbia River delta are also examined along with pelagic
sediments from the Southern Ocean, the Santa Barbara basin (station
M) and the equatorial Pacific Ocean. This sample set comprises fresh
water, estuarine and marine clastic sediments, carbonate and siliceous
oozes, as well as pelagic red clay sediments.
We focused on determining the amount of organic carbon associated with reactive iron phases by applying the citrate–dithionite iron
reduction method of ref. 15, which simultaneously dissolves from the
sediment matrix all solid reactive iron phases and the organic carbon
associated with these phases (OC-Fe). The reduction reaction is conducted at circumneutral pH using sodium bicarbonate as a buffer, thus
preventing the hydrolysis of organic matter as well as its protonation
and re-adsorption onto sediment particles, which occur under acidic
conditions. Whereas the extraction of the same samples with artificial
sea water released a negligible fraction of the total organic carbon (less
than 3%; results not shown), samples treated under the same experimental conditions after substituting trisodium citrate (complexing
agent) and sodium dithionite (reducing agent) for sodium chloride
(equivalent ionic strength) released on average 7.2 6 5.4% of the total
organic carbon (Supplementary Table 2). Because the organic carbon
released in these control experiments is not associated with iron,
results of individual control experiments were subtracted from the
amount of organic carbon released from the dithionite extractions
(see Supplementary method for results and a discussion on contamination and specificity for the OC-Fe fraction).
We determined that for all sediments tested, an average of
20.5 6 7.8% of the total organic carbon is directly associated with iron,
with the highest OC-Fe concentrations in the uppermost sediment
layers, where most of the reactive iron phases accumulate (Fig. 1).
Considering organic carbon burial within different depositional
settings—deltaic and continental margin sediments respectively
account for 44% and 45% of global organic carbon burial, whereas
pelagic sediments and high productivity zones, including anoxic
basins, respectively account for 5% and 6% (ref. 16)—we estimate that
the global pool of organic carbon specifically associated with iron
corresponds to 21.5 6 8.6% of the total sedimentary organic carbon,
or (19–45) 3 1015 g of organic carbon. Even in mature sediments
(1,000–1,500 yr old), 23–27% of the total organic carbon remains
bound to reactive iron oxide phases, suggesting that the strong association between iron and organic carbon may inhibit microbial organic
carbon degradation and enhance organic carbon preservation.
1
GEOTOP and Department of Chemistry and Biochemistry, Concordia University, 7141 Sherbrooke Street West, Montreal, Quebec H4B 1R6, Canada. 2GEOTOP and Earth and Planetary Sciences, McGill
University, 3450 University Street, Montreal, Quebec H3A 2A7, Canada.
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40
35
Deep sea
Deltaic and
estuarine
Continental margin
45
Anoxic
50
Sulphidic
LETTER RESEARCH
45
40
35
30
25
25
20
20
15
15
10
5
0
0
Equatorial Pacific 0° N
Equatorial Pacific 9° N
Station M
Eel River basin
–10
–12
–14
–16
–18
Equatorial Pacific 9° N (1)
Equatorial Pacific 0° N (1)
Station M (2)
Southern Ocean (1)
MacKenzie River delta (1)
Eel River (2)
Wash. coast 201 (1)
St Lawrence 25 (12)
Wash. coast 206 (1)
organic carbon to iron (OC:Fe) of 1.0 for the co-extracted species,
based on the maximal sorption capacity of reactive iron oxides for
natural organic matter3. However, co-precipitation and/or chelation
of organic compounds with iron generates low-density, organic-rich
structures with OC:Fe ratios between 6 and 10 (ref. 3). According to
the results of our dithionite extractions, typical continental margin
sediments overlain by oxic bottom waters yield an average OC:Fe ratio
of 4.0 6 2.8 (Supplementary Table 3), which greatly exceeds the
maximum sorption capacity of iron oxides but is consistent with the
formation of OC-Fe chelates. These chelates are predominantly organic
structures that probably resemble those depicted by the ‘onion model’18,
where organic molecules are ‘glued’ together by iron ions or nanophases
of iron oxides. The formation of such chelates from solution is possible
when the molar porewater OC:Fe ratio is approximately 10 (refs 19, 20).
This molar ratio is typically observed in anoxic sediment pore waters
such as that in the St Lawrence estuary (K.L., unpublished data) and in
the nearby Saguenay fjord21. The diffusion of dissolved iron(II) from
St Lawrence 23 (15)
Wash. coast 204 (1)
Wash. coast 202 (1)
St Lawrence gulf (2)
St Lawrence 20 (15)
Wash. coast 203 (1)
Wash. coast 213 (1)
Wash. coast 215 (1)
Mexican margin 303 (3)
Arabian Sea (2)
Wash. coast 205 (1)
Mexican margin 304 (3)
Mexican margin 305 (3)
Madeira turbidite 7–9 (1)
Saanish Inlet (1)
Indian margin (1)
Lake Brock (2)
Mexican margin 306 (3)
Black Sea (2)
In agreement with the calculations in ref. 3, our measurements
reveal that reactive iron phases do not provide sufficient surface area
(,5% of the total surface area of sediments; Supplementary Table 3) for
adsorption of the entire OC-Fe pool onto iron oxides. As an alternative
explanation, we propose the existence of largely organic OC-Fe macromolecular structures that are dissolved and dislodged from the sediment during iron reduction. Transmission electron microscopy studies
describe sedimentary organic matter as ‘‘discrete, discontinuous blebs’’
that adhere to the surface of sediment clay particles17. These blebs are
consistent with our proposed structure of OC-Fe, as are the findings of
ref. 16, where it was reported that sedimentary organic matter is not
spread evenly over clay particles but covers only about 15% of the
surface. We believe that iron or iron oxides are critical in providing
cohesion to these macromolecular structures, possibly fixing them to
clay particles through strong covalent bonds.
Calculations indicate that simple sorption of organic matter on
reactive iron oxide surfaces results in a maximum molar ratio of
Mackenzie River delta
Southern Ocean
Wash. coast 202
Wash. coast 204
St Lawrence 23
Wash. coast 206
Wash. coast 203
St Lawrence 25
Wash. coast 201
St Lawrence gulf
Wash. coast 205
Wash. coast 215
Wash. coast 213
St Lawrence 20
Mexican margin 303
Arabian Sea
Mexican margin 304
Mexican margin 305
Lake Brock
Saanish Inlet
Madeira turbidite
Indian margin
Mexican margin 306
0–0.5
9–11
0–0.5
3–4
16–19
0–3
0–1
9–11
0–20
––
0–0.5
4–5
22–27
0–0.5
5–6
19–22
0–0.5
10–12
0–0.5
14–16
22–27
11–12
11–12
11–12
0–35
1.5–5
470–500
11–12
11–12
0–35
11–12
11–12
0–35
11–12
0–1
15–20
0–1
8–12
0–1
15–20
0–0.5
10–12
5
Black Sea
Depth (cm)
10
δ13C (‰)
OC:Fe
OC-Fe (%)
30
Figure 1 | Control-corrected
percentage of the total sediment
organic carbon bound to reactive
iron phases. The OC-Fe considered
here (black line) is that dislodged
from the sediment during the
reductive dissolution of reactive iron
oxides. Depth intervals are indicated
below the x axis, along with the
corresponding geographical area
and, if relevant, sampling station.
Molar OC:Fe ratios of the uppermost
surface sediment layer are also shown
(black squares). The iron reduction
was carried out following the method
of ref. 15 without adding agents that
promote flocculation of the dissolved
organic matter after the reduction
step. Error bars, s.d.; n 5 12–15 for
the St Lawrence samples and n 5 3
for the others.
Figure 2 | Carbon isotopic
signatures of non-iron-bound and
iron-bound organic carbon for all
sediment samples. The samples
(non-iron-bound, black; iron-bound,
grey) were depth-integrated
whenever possible; the number of
depth intervals integrated is
indicated in parentheses above the
sample name.
d13C 5 (13C/12C)sample/
(13C/12C)VPDB 2 1; VPDB, Vienna
Pee Dee Belemnite. Error bars, s.d.;
n 5 12–15 for the St Lawrence
samples and n 5 3 for the others.
–20
–22
–24
–26
–28
–30
–35
–37
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RESEARCH LETTER
anoxic to surficial oxic sediments would trigger the oxidation of iron(II)
to iron(III) and the formation of very stable organic complexes22,23 (the
formation constant ranges from 1014 M21 for natural dissolved organic
carbon to 1052 M21 for siderophores).
Sediments bathed by oxygen-depleted bottom waters, such as in the
Black Sea, the Mexican margin (station 306) and the Indian margin,
host structures with high OC:Fe ratios (7 to 32). These organometallic
structures seem to be particularly stable under anaerobic conditions
and survive degradation. By contrast, in oxic environments, the
organic lining of these structures is progressively degraded, reducing
the OC:Fe ratio to values observed in typical continental margin sediments (Fig. 1). Long exposure to oxic conditions increases the fraction
of the total sedimentary organic carbon pool that is tightly adsorbed to
particle surfaces24, owing to the preferential degradation of organic
structures that are more loosely attached to the clay mineral matrix,
such as the OC-Fe chelates. Very long exposure to oxic conditions
results in the very low OC:Fe ratio observed at the deep-sea equatorial
Pacific site (0.36; Fig. 1).
We also analysed the isotopic composition (d13C and d15N) and
elemental composition (molar ratio of carbon to nitrogen) of the bulk
organic matter and the iron-associated organic carbon fractions of all
sediment samples. In most cases, we find that OC-Fe is enriched in 13C
(d13C increases by 1.7 6 2.8%; Fig. 2) and nitrogen (C:N decreases by
1.7 6 2.8) relative to the rest of the sedimentary organic carbon pool,
whereas d15N shows little or no fractionation (Supplementary Figs 1
and 2). Natural organic compounds rich in 13C include proteins and
carbohydrates25, which are rich in nitrogen and/or oxygen functionalities
that favour the formation of inner-sphere complexes with iron. The
preferential binding of such highly labile organic compounds to iron
may explain why reactive organic compounds can be preserved in sediments whereas other, more refractory, molecules are degraded4.
Our findings have far-reaching implications for our understanding
of organic matter cycling in sediments. First, the protection mechanism
described above, which preferentially shields 13C- and nitrogen-rich
organic compounds from microbial degradation, could help explain a
phenomenon that has puzzled organic geochemists for decades: the
replacement, seaward of river mouths, of terrigenous organic matter
from sediments by compounds bearing a more marine isotopic and
elemental signature26. Our data also show that the traditional sorptive
stabilization mechanism, which proposes that clay particles have a
preservative effect on organic matter through direct adsorption on their
surfaces4,27,28, does not describe accurately the mode of stabilization for
all organic compounds in sediments. Although more work is needed to
elucidate the exact nature of interactions between organic carbon and
iron, our data suggest that direct chelation or co-precipitation of
macromolecular OC-Fe structures has a significant role. Finally, our
results reveal that 21.5 6 8.6% of the organic carbon buried in surface
marine sediments (150 3 1015 g of organic carbon4), or a global mass of
(19–45) 3 1015 g of organic carbon, is preserved as a result of its
intimate association with reactive iron phases. Assuming that our
estimate also applies to organic carbon locked in the sedimentary rock
reservoir (150,000 3 1018 g of organic carbon4), iron-associated organic
carbon would account for (1,900–4,500) 3 1018 g of organic carbon, or
roughly 2,900–6,800 times the amount in the atmospheric carbon pool.
Hence, reactive iron phases serve as an extremely efficient ‘rusty sink’
for organic carbon and are a key factor in the long-term storage of
organic carbon and the global cycles of carbon, oxygen and sulphur.
Received 22 February 2011; accepted 10 January 2012.
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Supplementary Information is linked to the online version of the paper at
www.nature.com/nature.
Acknowledgements This work is dedicated to the memory of J. I. Hedges; in addition to
being an inspiration to Y.G., he provided several sediment samples used in this work.
We thank H. T. Yan for surface area measurements and the captains and crews of RV
Coriolis II for their help during sampling missions on the St Lawrence estuary.
L. N. Barazzuol is also acknowledged for her work during the first phase of the project.
This work was supported by grants (Y.G. and A.M.) and scholarships (K.L.) from NSERC,
CFI and FQRNT. This is GEOTOP contribution no. 2012-0001.
Author Contributions The original hypothesis was formulated by Y.G., and K.L., Y.G. and
A.M. designed the project, interpreted the data and wrote the manuscript. K.L. gathered
all the data. Groundwork for this study was carried out by A.O., who also contributed to
the writing of the manuscript.
Author Information Reprints and permissions information is available at
www.nature.com/reprints. The authors declare no competing financial interests.
Readers are welcome to comment on the online version of this article at
www.nature.com/nature. Correspondence and requests for materials should be
addressed to Y.G. (ygelinas@alcor.concordia.ca)
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