In the Asahi River, riffles and pools had been scaled down in the downstream reach of Asahi Dam due to sediment deposition in Asahi Dam reservoir. To improve this environmental problem, a flushing sediment tunnel was constructed so as to bypass Asahi Dam reservoir. In this study, first, the authors demonstrated the recovery of riffles and pools and the grain size distribution in the downstream reach by using the data of cross-sectional surveying, air photographs and field investigation. Next, authors’ two-dimensional model was applied to a series of flood events in the Asahi River. As a result, the flushing mechanism of Asahi Dam reservoir sedimentation, the recovery process of riffles and pools and the change in grain size distribution in the downstream reach were clarified by the model.