The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update

V Jalili, E Afgan, Q Gu, D Clements… - Nucleic acids …, 2020 - academic.oup.com
… In this article, we describe the latest advances in the Galaxy platform designed to … within
Galaxy analyses (histories) we have developed name tags, which allow users to see all analysis

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update

Nucleic Acids Research, 2022 - academic.oup.com
… from 12% in 2015 to 9% in 2020). Researchers have also increasingly spread their use
across a growing number of public Galaxy servers: in 2020, 20% are using public servers and 10…

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

E Afgan, D Baker, M Van den Beek… - Nucleic acids …, 2016 - academic.oup.com
… which users can perform computational analyses and have all of the … features enabling
biomedical analyses on a large scale. … entire Galaxy platform available on the Amazon cloud (16). …

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

E Afgan, D Baker, B Batut, M Van Den Beek… - Nucleic acids …, 2018 - academic.oup.com
… of Galaxy would not have been able to support this analysis. … can be updated by any
member of the Galaxy community. … public Galaxy servers (https://galaxyproject.org/public-galaxy-…

The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update

Nucleic Acids Research, 2024 - academic.oup.com
… goal of an accessible platform and making data science accessible for everyone, including
those with visual impairments. The GTN has a longstanding commitment to accessibility and …

The ChemicalToolbox: reproducible, user-friendly cheminformatics analysis on the Galaxy platform

SA Bray, X Lucas, A Kumar, BA Grüning - Journal of Cheminformatics, 2020 - Springer
… , a publicly available web server for performing cheminformatics analysis. The … Galaxy,
an open-source web-based platform which enables accessible and reproducible data analysis

Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine

Q Gu, A Kumar, S Bray, A Creason… - PLoS computational …, 2021 - journals.plos.org
… makes machine learning accessible to biomedical scientists who … the broader ecosystems
of biomedical analysis tools and a … case, we used Galaxy-ML to extend an analysis of machine …

The Dockstore: enhancing a community platform for sharing reproducible and accessible computational protocols

D Yuen, L Cabansay, A Duncan, G Luu… - Nucleic Acids …, 2021 - academic.oup.com
… the addition of collaboration features and analysis platform integrations … updates for followed
users, organizations, and workflows. … During 2020 and 2021 we also have been working on …

GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians

J Gangiredla, H Rand, D Benisatto, J Payne… - BMC genomics, 2021 - Springer
… sequenced during 2019/2020. Initially, Chilean isolates were sent for sequencing and …
Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

Accessible and reproducible mass spectrometry imaging data analysis in Galaxy

MC Föll, L Moritz, T Wollmann, MN Stillger… - …, 2019 - academic.oup.com
… Third, we apply the MSI Galaxy tools to a publicly available dataset to study N-glycan … of
a Galaxy-based MSI analysis pipeline that facilitates standardization and reproducibility and is …