(Q49614247)

21 February 2018

http://europepmc.org/abstract/MED/29272704

title

AP-1 Transcription Factors and the BAF Complex Mediate Signal-Dependent Enhancer Selection (English)

1 reference

21 February 2018

http://europepmc.org/abstract/MED/29272704

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Christopher J Cowley

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Cameron H Couch

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Xiaofeng Wang

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

David A Harmin

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Michael E Greenberg

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

publication date

1 December 2017

1 reference

21 February 2018

http://europepmc.org/abstract/MED/29272704

published in

Molecular Cell

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

volume

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

page(s)

1067-1082.e12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

31 May 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/5744881

based on heuristic

inferred from PubMed Central ID database lookup

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26 August 2018

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

26 August 2018

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26 August 2018

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Genome-wide identification and characterization of functional neuronal activity-dependent enhancers

26 August 2018

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Reorganization of enhancer patterns in transition from naive to primed pluripotency

26 August 2018

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26 August 2018

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26 August 2018

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Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation

26 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Effect of natural genetic variation on enhancer selection and function.

26 August 2018

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Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

26 August 2018

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26 August 2018

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Contribution of nucleosome binding preferences and co-occurring DNA sequences to transcription factor binding

26 August 2018

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From neural development to cognition: unexpected roles for chromatin

26 August 2018

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A dynamic H3K27ac signature identifies VEGFA-stimulated endothelial enhancers and requires EP300 activity

26 August 2018

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26 August 2018

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STATs shape the active enhancer landscape of T cell populations

26 August 2018

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Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions

26 August 2018

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26 August 2018

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26 August 2018

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26 August 2018

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Pioneer transcription factors: establishing competence for gene expression

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Lineage regulators direct BMP and Wnt pathways to cell-specific programs during differentiation and regeneration

26 August 2018

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Master transcription factors determine cell-type-specific responses to TGF-β signaling

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Mouse genomic variation and its effect on phenotypes and gene regulation

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Structural constraints in collaborative competition of transcription factors against the nucleosome

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Transcription factor AP1 potentiates chromatin accessibility and glucocorticoid receptor binding

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

The variant call format and VCFtools

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Lessons on transcriptional control from the serum response network

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

A unique chromatin signature uncovers early developmental enhancers in humans

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

High nucleosome occupancy is encoded at human regulatory sequences

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

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26 August 2018

1 reference

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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

26 August 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Design and analysis of ChIP-seq experiments for DNA-binding proteins

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Model-based analysis of ChIP-Seq (MACS)

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Wound repair and regeneration

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Regulation of dendritic development by neuron-specific chromatin remodeling complexes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Mice lacking JunB are osteopenic due to cell-autonomous osteoblast and osteoclast defects

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

AP-1: a double-edged sword in tumorigenesis

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Impaired long-term memory and NR2A-type NMDA receptor-dependent synaptic plasticity in mice lacking c-Fos in the CNS.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Collaborative competition mechanism for gene activation in vivo

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Identification of SWI.SNF complex subunit BAF60a as a determinant of the transactivation potential of Fos/Jun dimers

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

The transcriptional program in the response of human fibroblasts to serum

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

The binding of a Fos/Jun heterodimer can completely disrupt the structure of a nucleosome

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Asymmetrical recognition of the palindromic AP1 binding site (TRE) by Fos protein complexes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Effect of protein synthesis inhibitors on growth factor activation of c-fos, c-myc, and actin gene transcription

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

Existence of different Fos/Jun complexes during the G0-to-G1 transition and during exponential growth in mouse fibroblasts: differential role of Fos proteins

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5744881

10.1016/J.MOLCEL.2017.11.026

26 August 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29272704%20AND%20SRC:MED&resulttype=core&format=json