(Q47772182)

5 February 2018

title

Bacterial polymerase and yeast polymerase II use similar mechanisms for transcription through nucleosomes (English)

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5 February 2018

author name string

Wendy Walter

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5 February 2018

Maria L Kireeva

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5 February 2018

Vasily M Studitsky

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5 February 2018

Mikhail Kashlev

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5 February 2018

language of work or name

English

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publication date

8 July 2003

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5 February 2018

Journal of Biological Chemistry

number of pages

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based on heuristic

inferred from page(s)

published in

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5 February 2018

volume

278

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5 February 2018

issue

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5 February 2018

page(s)

36148-36156

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5 February 2018

Crystal structure of the nucleosome core particle at 2.8 A resolution

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

RNA polymerase II elongation through chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Octamer displacement and redistribution in transcription of single nucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

In vitro replication through nucleosomes without histone displacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Transfer of nucleosomes from parental to replicated chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

ATP-dependent nucleosome remodeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Control of elongation by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

RNA polymerase: structural similarities between bacterial RNA polymerase and eukaryotic RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Overextended RNA:DNA hybrid as a negative regulator of RNA polymerase II processivity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Histidine-tagged RNA polymerase of Escherichia coli and transcription in solid phase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Crucial role of the RNA:DNA hybrid in the processivity of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Histone contributions to the structure of DNA in the nucleosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Transcription on nucleosomal templates by RNA polymerase II in vitro: inhibition of elongation with enhancement of sequence-specific pausing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Assembly of RNA polymerase II preinitiation complexes before assembly of nucleosomes allows efficient initiation of transcription on nucleosomal templates

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Mobility of positioned nucleosomes on 5 S rDNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Rifampicin Sensitivity of the Components of DNA-dependent RNA Polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Yeast RNA polymerase II at 5 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Transcription elongation complex: structure and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

A model for the mechanism of polymerase translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Transcriptional arrest: Escherichia coli RNA polymerase translocates backward, leaving the 3' end of the RNA intact and extruded

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Cleavage, but not read-through, stimulation activity is responsible for three biologic functions of transcription elongation factor S-II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Recognition of a human arrest site is conserved between RNA polymerase II and prokaryotic RNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Elongation factor SII-dependent transcription by RNA polymerase II through a sequence-specific DNA-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

RNA polymerase clamps down

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Roles of RNA:DNA hybrid stability, RNA structure, and active site conformation in pausing by human RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Encounters of Saccharomyces cerevisiae RNA polymerase III with its transcription factors during RNA chain elongation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

E. coli DNA binding protein HU forms nucleosome-like structure with circular double-stranded DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Blocking of the Initiation-to-Elongation Transition by a Transdominant RNA Polymerase Mutation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Recombinant Escherichia coli RNA polymerase: purification of individually overexpressed subunits and in vitro assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

The H3/H4 tetramer blocks transcript elongation by RNA polymerase II in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Overcoming a nucleosomal barrier to transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Coupled-enzymatic assays for the rate and mechanism of DNA site exposure in a nucleosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

The nature of the nucleosomal barrier to transcription: direct observation of paused intermediates by electron cryomicroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

A nucleosome core is transferred out of the path of a transcribing polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

A histone octamer can step around a transcribing polymerase without leaving the template

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Mechanism of transcription through the nucleosome by eukaryotic RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

Facilitated transcription through the nucleosome at high ionic strength occurs via a histone octamer transfer mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

T7 RNA polymerase elongation complex structure and movement

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

On the mechanism of inhibition of phage T7 RNA polymerase by lac repressor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M305647200

21 January 2018

Identifiers

DOI

10.1074/JBC.M305647200

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5 February 2018

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5 February 2018