(Q38357489)

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Coupling of drug protonation to the specific binding of aminoglycosides to the A site of 16 S rRNA: elucidation of the number of drug amino groups involved and their identities

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Europe PubMed Central

PubMed publication ID

2 September 2017

Coupling of drug protonation to the specific binding of aminoglycosides to the A site of 16 S rRNA: elucidation of the number of drug amino groups involved and their identities (English)

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

author name string

Malvika Kaul

1

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

Christopher M Barbieri

2

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

John E Kerrigan

3

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

Daniel S Pilch

4

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Europe PubMed Central

PubMed publication ID

2 September 2017

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publication date

1 March 2003

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Europe PubMed Central

PubMed publication ID

2 September 2017

number of pages

15

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Journal of Molecular Biology

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Europe PubMed Central

PubMed publication ID

2 September 2017

326

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Europe PubMed Central

PubMed publication ID

2 September 2017

5

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Europe PubMed Central

PubMed publication ID

2 September 2017

1373-1387

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Europe PubMed Central

PubMed publication ID

2 September 2017

Interaction between the two conserved single-stranded regions at the decoding site of small subunit ribosomal RNA is essential for ribosome function

1 reference

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7 January 2021

Functional effects of base changes which further define the decoding center of Escherichia coli 16S ribosomal RNA: Mutation of C1404, G1405, C1496, G1497, and U1498

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901452-3

7 January 2021

Ribosomes and translation

1 reference

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7 January 2021

Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994

1 reference

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Dissociation rate of cognate peptidyl-tRNA from the A-site of hyper-accurate and error-prone ribosomes

1 reference

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7 January 2021

Recognition of the codon-anticodon helix by ribosomal RNA.

1 reference

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7 January 2021

Conformational switch in the decoding region of 16S rRNA during aminoacyl-tRNA selection on the ribosome.

1 reference

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7 January 2021

Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic

1 reference

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7 January 2021

Paromomycin binding induces a local conformational change in the A-site of 16 S rRNA

1 reference

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7 January 2021

Structural origins of gentamicin antibiotic action

1 reference

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7 January 2021

Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics

1 reference

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7 January 2021

Crystal structure of paromomycin docked into the eubacterial ribosomal decoding A site

1 reference

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7 January 2021

Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding a site

1 reference

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7 January 2021

RNA sequence determinants for aminoglycoside binding to an A-site rRNA model oligonucleotide

1 reference

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7 January 2021

Binding of neomycin-class aminoglycoside antibiotics to the A-site of 16 S rRNA

1 reference

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7 January 2021

Effect of mutations in the A site of 16 S rRNA on aminoglycoside antibiotic-ribosome interaction.

1 reference

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7 January 2021

Thermodynamics of aminoglycoside-rRNA recognition: the binding of neomycin-class aminoglycosides to the A site of 16S rRNA.

1 reference

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7 January 2021

Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity

1 reference

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7 January 2021

Use of liquid hydrocarbon and amide transfer data to estimate contributions to thermodynamic functions of protein folding from the removal of nonpolar and polar surface from water

1 reference

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7 January 2021

Coupling of local folding to site-specific binding of proteins to DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901452-3

7 January 2021

Tight binding affinities determined from thermodynamic linkage to protons by titration calorimetry

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901452-3

7 January 2021

Aminoglycoside binding in the major groove of duplex RNA: the thermodynamic and electrostatic forces that govern recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901452-3

7 January 2021

Substrate promiscuity of an aminoglycoside antibiotic resistance enzyme via target mimicry

1 reference

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7 January 2021

Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves

1 reference

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7 January 2021

Determining atom-centered monopoles from molecular electrostatic potentials. The need for high sampling density in formamide conformational analysis

1 reference

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7 January 2021

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901452-3

7 January 2021

Comparison of simple potential functions for simulating liquid water

1 reference

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7 January 2021

Differential scanning calorimetric study of the thermal unfolding of Taka-amylase A from Aspergillus oryzae

1 reference

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7 January 2021

Identifiers

10.1016/S0022-2836(02)01452-3

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 September 2017

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