(Q37584905)

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lincRNAs: genomics, evolution, and mechanisms

scientific article published on July 2013

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scholarly article

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Europe PubMed Central

PMC publication ID

21 August 2017

lincRNAs: genomics, evolution, and mechanisms (English)

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Europe PubMed Central

PMC publication ID

21 August 2017

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Igor Ulitsky

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David P. Bartel

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David P Bartel

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Europe PubMed Central

PMC publication ID

21 August 2017

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publication date

1 July 2013

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Europe PubMed Central

PMC publication ID

21 August 2017

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Europe PubMed Central

PMC publication ID

21 August 2017

154

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Europe PubMed Central

PMC publication ID

21 August 2017

1

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

26-46

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Europe PubMed Central

PMC publication ID

21 August 2017

Circular RNAs are a large class of animal RNAs with regulatory potency

1 reference

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Natural RNA circles function as efficient microRNA sponges

1 reference

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Noncoding RNA and Polycomb recruitment.

1 reference

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Deep proteome coverage based on ribosome profiling aids mass spectrometry-based protein and peptide discovery and provides evidence of alternative translation products and near-cognate translation initiation events

1 reference

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Activating RNAs associate with Mediator to enhance chromatin architecture and transcription

1 reference

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The NeST long ncRNA controls microbial susceptibility and epigenetic activation of the interferon-γ locus

1 reference

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23 August 2017

Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells

1 reference

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The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse

1 reference

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Braveheart, a long noncoding RNA required for cardiovascular lineage commitment

1 reference

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Control of somatic tissue differentiation by the long non-coding RNA TINCR.

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Transposable elements reveal a stem cell-specific class of long noncoding RNAs

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Peptidomic discovery of short open reading frame-encoded peptides in human cells.

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23 August 2017

Evidence for conserved post-transcriptional roles of unitary pseudogenes and for frequent bifunctionality of mRNAs

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Genome-wide analysis uncovers regulation of long intergenic noncoding RNAs in Arabidopsis.

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Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENβ noncoding RNAs

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23 August 2017

Long non-coding RNA gadd7 interacts with TDP-43 and regulates Cdk6 mRNA decay

1 reference

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23 August 2017

A triple helix stabilizes the 3' ends of long noncoding RNAs that lack poly(A) tails

1 reference

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Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs

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RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development

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23 August 2017

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

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23 August 2017

Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs

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23 August 2017

Landscape of transcription in human cells

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23 August 2017

The GENCODE pseudogene resource

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Aberrant expression of long noncoding RNAs in autistic brain

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23 August 2017

Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers

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23 August 2017

Computational identification and functional predictions of long noncoding RNA in Zea mays

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Loss of the abundant nuclear non-coding RNA MALAT1 is compatible with life and development

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23 August 2017

Rapid turnover of long noncoding RNAs and the evolution of gene expression

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23 August 2017

LincRNA-p21 suppresses target mRNA translation

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23 August 2017

The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult

1 reference

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23 August 2017

Proto-genes and de novo gene birth

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23 August 2017

Extensive alternative polyadenylation during zebrafish development

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23 August 2017

Malat1 is not an essential component of nuclear speckles in mice

1 reference

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23 August 2017

Long noncoding RNAs in C. elegans

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23 August 2017

Genome regulation by long noncoding RNAs.

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23 August 2017

A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy

1 reference

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23 August 2017

Genome-wide analysis of long noncoding RNA stability

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23 August 2017

Identification and properties of 1,119 candidate lincRNA loci in the Drosophila melanogaster genome

1 reference

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23 August 2017

Genome-wide determination of RNA stability reveals hundreds of short-lived noncoding transcripts in mammals.

1 reference

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23 August 2017

Structural architecture of the human long non-coding RNA, steroid receptor RNA activator

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23 August 2017

Modular regulatory principles of large non-coding RNAs

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23 August 2017

Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution

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23 August 2017

Long noncoding RNA-mediated anti-apoptotic activity in murine erythroid terminal differentiation

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The genomic binding sites of a noncoding RNA.

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23 August 2017

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

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23 August 2017

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

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23 August 2017

Targeted RNA sequencing reveals the deep complexity of the human transcriptome

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Negative correlation between expression level and evolutionary rate of long intergenic noncoding RNAs

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Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes

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Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions

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The noncoding RNA Mistral activates Hoxa6 and Hoxa7 expression and stem cell differentiation by recruiting MLL1 to chromatin

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Tsx produces a long noncoding RNA and has general functions in the germline, stem cells, and brain

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

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lincRNAs act in the circuitry controlling pluripotency and differentiation

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23 August 2017

Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression

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23 August 2017

YY1 tethers Xist RNA to the inactive X nucleation center

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Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters

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Structural and functional differences in the long non-coding RNA hotair in mouse and human

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Regulation of X-chromosome inactivation by the X-inactivation centre.

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Competition between a noncoding exon and introns: Gomafu contains tandem UACUAAC repeats and associates with splicing factor-1.

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A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

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23 August 2017

Pseudogenes: pseudo-functional or key regulators in health and disease?

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RNAcode: robust discrimination of coding and noncoding regions in comparative sequence data.

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lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements

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Non-coding RNAs as regulators of embryogenesis

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Genome-wide identification of polycomb-associated RNAs by RIP-seq

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Locked nucleic acids (LNAs) reveal sequence requirements and kinetics of Xist RNA localization to the X chromosome

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Poly(A) Tail Recognition by a Viral RNA Element Through Assembly of a Triple Helix

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23 August 2017

Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs

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23 August 2017

Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA

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Emerging Roles for Natural MicroRNA Sponges

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23 August 2017

Long noncoding RNAs with enhancer-like function in human cells

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23 August 2017

Highly ordered spatial organization of the structural long noncoding NEAT1 RNAs within paraspeckle nuclear bodies

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23 August 2017

The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation

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23 August 2017

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23 August 2017

Mammalian microRNAs predominantly act to decrease target mRNA levels

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23 August 2017

A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response

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23 August 2017

TERRA biogenesis, turnover and implications for function.

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23 August 2017

Long noncoding RNA as modular scaffold of histone modification complexes

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23 August 2017

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays

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23 August 2017

Down-regulation of a host microRNA by a Herpesvirus saimiri noncoding RNA

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23 August 2017

Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a

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23 August 2017

Most "dark matter" transcripts are associated with known genes

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23 August 2017

A large fraction of extragenic RNA pol II transcription sites overlap enhancers

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23 August 2017

The long noncoding RNA RNCR2 directs mouse retinal cell specification

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23 August 2017

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

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23 August 2017

Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

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23 August 2017

Widespread transcription at neuronal activity-regulated enhancers

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23 August 2017

Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor

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23 August 2017

2-D structure of the A region of Xist RNA and its implication for PRC2 association

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

De novo prediction of structured RNAs from genomic sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Catalogues of mammalian long noncoding RNAs: modest conservation and incompleteness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Assessing the genomic evidence for conserved transcribed pseudogenes under selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Lessons from X-chromosome inactivation: long ncRNA as guides and tethers to the epigenome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Lineage-specific biology revealed by a finished genome assembly of the mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Evolution and functions of long noncoding RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

MicroRNAs: target recognition and regulatory functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Patterns of exon-intron architecture variation of genes in eukaryotic genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Small RNAs in transcriptional gene silencing and genome defence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Differentiating protein-coding and noncoding RNA: challenges and ambiguities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

A dual origin of the Xist gene from a protein-coding gene and a set of transposable elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

De novo origination of a new protein-coding gene in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Specific expression of long noncoding RNAs in the mouse brain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Target mimicry provides a new mechanism for regulation of microRNA activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

The mRNA-like noncoding RNA Gomafu constitutes a novel nuclear domain in a subset of neurons.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Peptides encoded by short ORFs control development and define a new eukaryotic gene family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Transcriptional noise and the fidelity of initiation by RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Recruitment of PRC1 function at the initiation of X inactivation independent of PRC2 and silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

High guanine and cytosine content increases mRNA levels in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Distinguishing protein-coding from non-coding RNAs through support vector machines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

CAGE: cap analysis of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Evidence for conservation and selection of upstream open reading frames suggests probable encoding of bioactive peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

A strategy for probing the function of noncoding RNAs finds a repressor of NFAT

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

The transcriptional landscape of the mammalian genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Potential structural role of non-coding and coding RNAs in the organization of the cytoskeleton at the vegetal cortex of Xenopus oocytes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Transcriptional interference--a crash course

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Evolution and functional classification of vertebrate gene deserts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Global identification of human transcribed sequences with genome tiling arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Genomic analysis of mouse retinal development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

The non-coding Air RNA is required for silencing autosomal imprinted genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Noncoding RNA gene detection using comparative sequence analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Chromosomal silencing and localization are mediated by different domains of Xist RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Computational identification of noncoding RNAs in E. coli by comparative genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

PNA interference mapping demonstrates functional domains in the noncoding RNA Xist

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Characterization of the genomic Xist locus in rodents reveals conservation of overall gene structure and tandem repeats but rapid evolution of unique sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

CRITICA: coding region identification tool invoking comparative analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

A steroid receptor coactivator, SRA, functions as an RNA and is present in an SRC-1 complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Polyadenylylated nuclear RNA encoded by Kaposi sarcoma-associated herpesvirus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Requirement for Xist in X chromosome inactivation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Triplex DNA structures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

The human XIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

23 August 2017

Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

6 September 2017

Long noncoding RNAs with snoRNA ends

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

6 September 2017

Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

6 September 2017

Secondary structure model for bacterial 16S ribosomal RNA: phylogenetic, enzymatic and chemical evidence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

14 September 2017

Regulation and expression of a growth arrest-specific gene (gas5) during growth, differentiation, and development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

14 September 2017

Conservation of a triple-helix-forming RNA stability element in noncoding and genomic RNAs of diverse viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

25 June 2018

Translation drives mRNA quality control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

25 June 2018

Genome-wide computational identification and manual annotation of human long noncoding RNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

25 June 2018

Synthesis in vitro of a seven amino acid peptide encoded in the leader RNA of Rous sarcoma virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

25 June 2018

Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

1 September 2018

First exon length controls active chromatin signatures and transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

1 September 2018

Small peptides switch the transcriptional activity of Shavenbaby during Drosophila embryogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

1 September 2018

Identification of protein interaction regions of VINC/NEAT1/Men epsilon RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

1 September 2018

Molecular biology: RNA discrimination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

5 November 2018

Identification of a Rapid Mammalian Deadenylation-Dependent Decay Pathway and Its Inhibition by a Viral RNA Element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3924787

3 December 2018

Compact and ordered collapse of randomly generated RNA sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/23827673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional analysis of the highly conserved exon IV of XIST RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/23827673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mouse transcriptome: neutral evolution of 'non-coding' complementary DNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/23827673

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.CELL.2013.06.020

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

21 August 2017

ResearchGate publication ID

0 references

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