(Q36765190)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

title

Sequence features accurately predict genome-wide MeCP2 binding in vivo (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

H Tomas Rube

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

Wooje Lee

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

Miroslav Hejna

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

Huaiyang Chen

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

Dag H Yasui

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

John F Hess

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

Qizhi Gong

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

language of work or name

English

0 references

publication date

24 March 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

published in

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

volume

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

page(s)

11025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

30 March 2020

start time

24 March 2016

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

cites work

MeCP2 binds to non-CG methylated DNA as neurons mature, influencing transcription and the timing of onset for Rett syndrome

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29 September 2017

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Cell-type-specific repression by methyl-CpG-binding protein 2 is biased toward long genes

29 September 2017

1 reference

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29 September 2017

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29 September 2017

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Global transcriptional and translational repression in human-embryonic-stem-cell-derived Rett syndrome neurons

29 September 2017

1 reference

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Loss of MeCP2 function is associated with distinct gene expression changes in the striatum

29 September 2017

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Global epigenomic reconfiguration during mammalian brain development

29 September 2017

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

29 September 2017

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An AT-hook domain in MeCP2 determines the clinical course of Rett syndrome and related disorders

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Differential analysis of gene regulation at transcript resolution with RNA-seq

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

CHANCE: comprehensive software for quality control and validation of ChIP-seq data

29 September 2017

1 reference

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Normalization, bias correction, and peak calling for ChIP-seq

29 September 2017

1 reference

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Fast gapped-read alignment with Bowtie 2

29 September 2017

1 reference

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Summarizing and correcting the GC content bias in high-throughput sequencing

29 September 2017

1 reference

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Fast computation and applications of genome mappability

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Genome-wide activity-dependent MeCP2 phosphorylation regulates nervous system development and function

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

The role of MeCP2 in the brain.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

G+C content dominates intrinsic nucleosome occupancy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Mouse models of MeCP2 disorders share gene expression changes in the cerebellum and hypothalamus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Chromatin structure analyses identify miRNA promoters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Model-based analysis of ChIP-Seq (MACS)

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

MeCP2, a key contributor to neurological disease, activates and represses transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

A high-resolution atlas of nucleosome occupancy in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Nucleosome positioning signals in genomic DNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Isotropic fractionator: a simple, rapid method for the quantification of total cell and neuron numbers in the brain.

29 September 2017

1 reference

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The ontology of the gene ontology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Derepression of BDNF Transcription Involves Calcium-Dependent Phosphorylation of MeCP2

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Transcriptional profiling of a mouse model for Rett syndrome reveals subtle transcriptional changes in the brain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Insight into Rett syndrome: MeCP2 levels display tissue- and cell-specific differences and correlate with neuronal maturation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

A mouse Mecp2-null mutation causes neurological symptoms that mimic Rett syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Methyl-CpG-binding protein 2 mutations in Rett syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Dissection of the methyl-CpG binding domain from the chromosomal protein MeCP2

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Characterization of MeCP2, a vertebrate DNA binding protein with affinity for methylated DNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

MeCP2 regulates activity-dependent transcriptional responses in olfactory sensory neurons

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Purification of the MeCP2/histone deacetylase complex from Xenopus laevis

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Methylation-dependent and -independent genomic targeting principles of the MBD protein family.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Disease modeling using embryonic stem cells: MeCP2 regulates nuclear size and RNA synthesis in neurons

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

DNA-binding factors shape the mouse methylome at distal regulatory regions

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

MeCP2 preferentially binds to methylated linker DNA in the absence of the terminal tail of histone H3 and independently of histone acetylation

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

High-throughput mapping of the chromatin structure of human promoters.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

Multiple modes of interaction between the methylated DNA binding protein MeCP2 and chromatin.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4820824

The methyl-CpG binding transcriptional repressor MeCP2 stably associates with nucleosomal DNA

5 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27008915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

MeCP2-chromatin interactions include the formation of chromatosome-like structures and are altered in mutations causing Rett syndrome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27008915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS11025

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json

30 March 2020

PubMed publication ID

27008915

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27008915%20AND%20SRC:MED&resulttype=core&format=json