(Q36452445)

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Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-rep

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18039796%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-repeat analysis, amplified fragment length polymorphism, and surface layer protein A gene sequence typing (English)

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28 December 2019

electrophoresis

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Clostridium difficile

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based on heuristic

inferred from title

5

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28 December 2019

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28 December 2019

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Brandi Limbago

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28 December 2019

L. Clifford McDonald

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L Clifford McDonald

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28 December 2019

George E Killgore

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George Killgore

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28 December 2019

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Angela Thompson

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28 December 2019

Stuart Johnson

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28 December 2019

Jon Brazier

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28 December 2019

Jacques Pepin

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28 December 2019

Paul Savelkoul

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28 December 2019

Brad Nicholson

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28 December 2019

Renate J van den Berg

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28 December 2019

Haru Kato

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28 December 2019

Susan P Sambol

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28 December 2019

Walter Zukowski

13

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28 December 2019

Christopher Woods

14

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28 December 2019

Dale N Gerding

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28 December 2019

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26 November 2007

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28 December 2019

Journal of Clinical Microbiology

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28 December 2019

46

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28 December 2019

2

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28 December 2019

431-437

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28 December 2019

Clinical features of Clostridium difficile-associated infections and molecular characterization of strains: results of a retrospective study, 2000-2004.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Emergence of Clostridium difficile-associated disease in North America and Europe.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Multilocus variable-number tandem-repeat analysis for investigation of Clostridium difficile transmission in Hospitals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Molecular analysis of Clostridium difficile PCR ribotype 027 isolates from Eastern and Western Canada

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

An epidemic, toxin gene-variant strain of Clostridium difficile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

The emergence of Clostridium difficile as a pathogen of food animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Clostridium difficile-associated diarrhea in a region of Quebec from 1991 to 2003: a changing pattern of disease severity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Multilocus sequence typing analysis of human and animal Clostridium difficile isolates of various toxigenic types

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Determining confidence intervals when measuring genetic diversity and the discriminatory abilities of typing methods for microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Pulsed-field gel electrophoresis of degradation-sensitive DNAs from Clostridium difficile PCR ribotype 1 strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Comparison of PCR-ribotyping, arbitrarily primed PCR, and pulsed-field gel electrophoresis for typing Clostridium difficile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Production of actin-specific ADP-ribosyltransferase (binary toxin) by strains of Clostridium difficile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

PCR targeted to the 16S-23S rRNA gene intergenic spacer region of Clostridium difficile and construction of a library consisting of 116 different PCR ribotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

A novel toxinotyping scheme and correlation of toxinotypes with serogroups of Clostridium difficile isolates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Typing of Clostridium difficile by western immunoblotting with 10 different antisera

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Development of a rapid and efficient restriction endonuclease analysis typing system for Clostridium difficile and correlation with other typing systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Use of arbitrary primer PCR to type Clostridium difficile and comparison of results with those by immunoblot typing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Investigation of an outbreak of antibiotic-associated colitis by various typing methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Bacteriophage and bacteriocin typing scheme for Clostridium difficile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Serogrouping of Clostridium difficile strains by slide agglutination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Application of whole-cell DNA restriction endonuclease profiles to the epidemiology of Clostridium difficile-induced diarrhea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Antibiotic-Associated Pseudomembranous Colitis Due to Toxin-Producing Clostridia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

30 September 2017

Clostridium difficile in retail ground meat, Canada

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

28 June 2018

Clostridium difficile PCR ribotypes in calves, Canada

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

28 June 2018

Typing and subtyping of Clostridium difficile isolates by using multiple-locus variable-number tandem-repeat analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

28 June 2018

A cautionary tale: Lack of consistency in allele sizes between two laboratories for a published multilocus microsatellite typing system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

28 June 2018

Pulsed-field gel electrophoresis can yield DNA fingerprints of degradation-susceptible Clostridium difficile strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

28 June 2018

Amplified-fragment length polymorphism analysis of Propionibacterium isolates implicated in contamination of blood products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

21 September 2018

Typing by sequencing the slpA gene of Clostridium difficile strains causing multiple outbreaks in Japan

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

21 September 2018

Development of a new PCR-ribotyping method for Clostridium difficile based on ribosomal RNA gene sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

21 September 2018

Preliminary findings of the international typing study on Clostridium difficile. International Clostridium Difficile Study Group.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238077

21 September 2018

The epidemiology of Clostridium difficile with use of a typing scheme: nosocomial acquisition and cross-infection among immunocompromised patients.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18039796

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multicenter typing comparison of sporadic and outbreak Clostridium difficile isolates from geographically diverse hospitals

1 reference

https://pubmed.ncbi.nlm.nih.gov/18039796

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JCM.01484-07

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Europe PubMed Central

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28 December 2019

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28 December 2019

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Europe PubMed Central

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28 December 2019

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