(Q35557677)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

title

Extensive characterization of NF-κB binding uncovers non-canonical motifs and advances the interpretation of genetic functional traits (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

0 references

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Martha Bulyk

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Daniel Wong

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Ana Teixeira

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Spyros Oikonomopoulos

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Imtiaz Nisar Lone

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

David Saliba

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Trevor Siggers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Stefan Dimitrov

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Jiannis Ragoussis

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

publication date

29 July 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

volume

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

page(s)

R70

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

Determining the specificity of protein–DNA interactions

9 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Inflammatory bowel diseases, celiac disease, and bone

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Genome-wide allele-specific analysis: insights into regulatory variation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Inflammation in neurodegenerative diseases

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Cytokines as therapeutic targets in SLE.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Biliary innate immunity in the pathogenesis of biliary diseases

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Multiplexed massively parallel SELEX for characterization of human transcription factor binding specificities

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Heritable individual-specific and allele-specific chromatin signatures in humans

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Variation in transcription factor binding among humans

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Genetic analysis of variation in transcription factor binding in yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Global patterns of cis variation in human cells revealed by high-density allelic expression analysis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Insights from genomic profiling of transcription factors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Diversity and complexity in DNA recognition by transcription factors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Universal protein-binding microarrays for the comprehensive characterization of the DNA-binding specificities of transcription factors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Accuracy and reproducibility of protein-DNA microarray technology

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Current insights into the regulation of programmed cell death by NF-kappaB.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

NF-kappaB and the immune response

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Introduction to NF-kappaB: players, pathways, perspectives

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Regulation of mating and filamentation genes by two distinct Ste12 complexes in Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Molecular basis of common variable immunodeficiency

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

In vitro selection of DNA binding sites for ABF1 protein from Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

enoLOGOS: a versatile web tool for energy normalized sequence logos

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

The histone octamer is invisible when NF-kappaB binds to the nucleosome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Functions of NF-kappaB1 and NF-kappaB2 in immune cell biology

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Quantitative high-throughput analysis of transcription factor binding specificities.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

MATCH: A tool for searching transcription factor binding sites in DNA sequences

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

NF-kappaB regulation in the immune system

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Quantitative prediction of NF-kappa B DNA-protein interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

NF-kappaB p65 (RelA) homodimer uses distinct mechanisms to recognize DNA targets

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Characterization of the DNA-binding domains from the yeast cell-cycle transcription factors Mbp1 and Swi4.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

UPA, a universal protein array system for quantitative detection of protein-protein, protein-DNA, protein-RNA and protein-ligand interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Construction, expression, purification and functional analysis of recombinant NFkappaB p50/p65 heterodimer

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Crystal structure of p50/p65 heterodimer of transcription factor NF-kappaB bound to DNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

A novel DNA recognition mode by the NF-kappa B p65 homodimer

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

Distinguishing direct versus indirect transcription factor-DNA interactions

27 July 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

Quantifying DNA-protein interactions by double-stranded DNA arrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

Bind-n-Seq: high-throughput analysis of in vitro protein-DNA interactions using massively parallel sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

Functional consequences of a polymorphism affecting NF-kappaB p50-p50 binding to the TNF promoter region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

Activation of IKKalpha target genes depends on recognition of specific kappaB binding sites by RelB:p52 dimers

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

Sequence features of DNA binding sites reveal structural class of associated transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

High-throughput SELEX SAGE method for quantitative modeling of transcription-factor binding sites.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218832

26 September 2018

1 reference

https://api.crossref.org/works/10.1186%2FGB-2011-12-7-R70

In vitro selection of optimal RelB/p52 DNA-binding motifs

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21801342

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2011-12-7-R70

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

PubMed publication ID

21801342

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21801342%20AND%20SRC:MED&resulttype=core&format=json