(Q33783171)

29 July 2017

title

Estimating the proportion of microarray probes expressed in an RNA sample (English)

1 reference

29 July 2017

Hamish S Scott

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Gordon K Smyth

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Douglas J Hilton

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Louis Schofield

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29 July 2017

Wei Shi

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29 July 2017

Carolyn A de Graaf

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29 July 2017

Sarah A Kinkel

1 reference

29 July 2017

Ariel H Achtman

1 reference

29 July 2017

Tracey Baldwin

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29 July 2017

language of work or name

English

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publication date

7 January 2010

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29 July 2017

published in

Nucleic Acids Research

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29 July 2017

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29 July 2017

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29 July 2017

page(s)

2168-2176

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describes a project that uses

29 July 2017

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/2853118

based on heuristic

inferred from PubMed Central ID database lookup

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4 July 2018

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Illumina WG-6 BeadChip strips should be normalized separately

4 July 2018

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Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers

4 July 2018

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Aire-deficient C57BL/6 mice mimicking the common human 13-base pair deletion mutation present with only a mild autoimmune phenotype

4 July 2018

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Filtering for increased power for microarray data analysis

4 July 2018

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Microarray background correction: maximum likelihood estimation for the normal-exponential convolution

4 July 2018

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The variable immunological self: genetic variation and nongenetic noise in Aire-regulated transcription

4 July 2018

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4 July 2018

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A gene expression bar code for microarray data

4 July 2018

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A comparison of background correction methods for two-colour microarrays

4 July 2018

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4 July 2018

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Correcting for sequence biases in present/absent calls

4 July 2018

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4 July 2018

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Spontaneous autoimmunity prevented by thymic expression of a single self-antigen

4 July 2018

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Parameter estimation for the exponential-normal convolution model for background correction of affymetrix GeneChip data

4 July 2018

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The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

4 July 2018

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

4 July 2018

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A bivalent chromatin structure marks key developmental genes in embryonic stem cells

4 July 2018

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Promiscuous gene expression in thymic epithelial cells is regulated at multiple levels

4 July 2018

1 reference

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Gene dosage--limiting role of Aire in thymic expression, clonal deletion, and organ-specific autoimmunity.

4 July 2018

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Medullary epithelial cells of the human thymus express a highly diverse selection of tissue-specific genes colocalized in chromosomal clusters

4 July 2018

1 reference

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

4 July 2018

1 reference

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Aire regulates negative selection of organ-specific T cells

4 July 2018

1 reference

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Can transcriptome size be estimated from SAGE catalogs?

4 July 2018

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Transcriptional accessibility for genes of multiple tissues and hematopoietic lineages is hierarchically controlled during early hematopoiesis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Projection of an immunological self shadow within the thymus by the aire protein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Aire deficient mice develop multiple features of APECED phenotype and show altered immune response

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Significance analysis of microarrays applied to the ionizing radiation response

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

A clonogenic common myeloid progenitor that gives rise to all myeloid lineages

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

An autoimmune disease, APECED, caused by mutations in a novel gene featuring two PHD-type zinc-finger domains

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Positional cloning of the APECED gene

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Identification of clonogenic common lymphoid progenitors in mouse bone marrow

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Purification and characterization of mouse hematopoietic stem cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

Promiscuous gene expression in medullary thymic epithelial cells mirrors the peripheral self.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853118

30 October 2018

Identifiers

DOI

10.1093/NAR/GKP1204

1 reference

29 July 2017

1 reference

29 July 2017

1 reference