(Q33683429)

28 July 2017

title

Identification and characterization of multi-species conserved sequences (English)

1 reference

28 July 2017

David Haussler

0 references

Mathieu Blanchette

series ordinal

object named as

Mathieu Blanchette

1 reference

NISC Comparative Sequencing Program

28 July 2017

series ordinal

object named as

NISC Comparative Sequencing Program

1 reference

28 July 2017

Eric D Green

1 reference

28 July 2017

Elliott H Margulies

1 reference

28 July 2017

publication date

1 December 2003

1 reference

28 July 2017

1 reference

28 July 2017

1 reference

28 July 2017

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28 July 2017

page(s)

2507-2518

1 reference

Comparative analyses of multi-species sequences from targeted genomic regions

28 July 2017

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Distinguishing regulatory DNA from neutral sites

21 June 2018

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21 June 2018

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Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution

21 June 2018

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TRANSFAC: transcriptional regulation, from patterns to profiles

21 June 2018

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The UCSC Genome Browser Database

21 June 2018

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Ensembl 2002: accommodating comparative genomics

21 June 2018

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Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

21 June 2018

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Initial sequencing and comparative analysis of the mouse genome

21 June 2018

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The RAY1/ST7 tumor-suppressor locus on chromosome 7q31 represents a complex multi-transcript system

21 June 2018

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Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

21 June 2018

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21 June 2018

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Computational genomics of noncoding RNA genes

21 June 2018

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rVista for comparative sequence-based discovery of functional transcription factor binding sites

21 June 2018

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Discovery of regulatory elements by a computational method for phylogenetic footprinting

21 June 2018

1 reference

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Noncoding RNA gene detection using comparative sequence analysis

21 June 2018

1 reference

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Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome

21 June 2018

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An apolipoprotein influencing triglycerides in humans and mice revealed by comparative sequencing

21 June 2018

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Nuclear post-transcriptional control of gene expression

21 June 2018

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21 June 2018

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Integrating genomic homology into gene structure prediction.

21 June 2018

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Human chromosome 19 and related regions in mouse: conservative and lineage-specific evolution

21 June 2018

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Evaluation of gene-finding programs on mammalian sequences

21 June 2018

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Genomic strategies to identify mammalian regulatory sequences

21 June 2018

1 reference

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Initial sequencing and analysis of the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes

21 June 2018

1 reference

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VISTA : visualizing global DNA sequence alignments of arbitrary length

21 June 2018

1 reference

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Inhibition of MMH (Met murine hepatocyte) cell differentiation by TGF(beta) is abrogated by pre-treatment with the heritable differentiation effector FGF1.

21 June 2018

1 reference

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Active conservation of noncoding sequences revealed by three-way species comparisons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Conserved noncoding sequences are reliable guides to regulatory elements.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Human and mouse gene structure: comparative analysis and application to exon prediction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

A greedy algorithm for aligning DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

PipMaker--a web server for aligning two genomic DNA sequences

21 June 2018

1 reference

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Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Analysis of vertebrate SCL loci identifies conserved enhancers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Identifying DNA and protein patterns with statistically significant alignments of multiple sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Comparison of five methods for finding conserved sequences in multiple alignments of gene regulatory regions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

The role of the 5' untranslated region of an mRNA in translation regulation during development

21 June 2018

1 reference

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21 June 2018

1 reference

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Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Prediction of complete gene structures in human genomic DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

A generalized hidden Markov model for the recognition of human genes in DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

21 June 2018

1 reference

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Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Human-mouse genome comparisons to locate regulatory sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

30 October 2018

Gene discovery in dbEST.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

Numerous potentially functional but non-genic conserved sequences on human chromosome 21

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403793

30 October 2018

Identifiers

DOI

10.1101/GR.1602203

1 reference

release_dcbaceefevfyhhofqluqmqeznu

28 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/dcbaceefevfyhhofqluqmqeznu

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

403793

1 reference

28 July 2017

1 reference