(Q33611702)

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Genome-wide views of chromatin structure

scientific article published in January 2009

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

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Europe PubMed Central

Genome-wide views of chromatin structure (English)

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Europe PubMed Central

PubMed publication ID

28 July 2017

object named as

Oliver J Rando

1

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author name string

Howard Y Chang

2

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Europe PubMed Central

PubMed publication ID

28 July 2017

publication date

1 January 2009

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Europe PubMed Central

PubMed publication ID

28 July 2017

number of pages

27

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based on heuristic

inferred from page(s)

Annual Review of Biochemistry

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Europe PubMed Central

PubMed publication ID

28 July 2017

78

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

245-271

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Widespread bidirectional promoters are the major source of cryptic transcripts in yeast

1 reference

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21 June 2018

Bidirectional promoters generate pervasive transcription in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The DNA-encoded nucleosome organization of a eukaryotic genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Cell cycle- and chaperone-mediated regulation of H3K56ac incorporation in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Control of differentiation in a self-renewing mammalian tissue by the histone demethylase JMJD3

1 reference

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21 June 2018

Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Combinatorial patterns of histone acetylations and methylations in the human genome

1 reference

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21 June 2018

A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

1 reference

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21 June 2018

Dissecting direct reprogramming through integrative genomic analysis

1 reference

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21 June 2018

Nucleosome retention and the stochastic nature of promoter chromatin remodeling for transcription

1 reference

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21 June 2018

Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation

1 reference

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21 June 2018

Two strategies for gene regulation by promoter nucleosomes

1 reference

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21 June 2018

Prediction and analysis of nucleosome exclusion regions in the human genome

1 reference

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21 June 2018

Chromatin decouples promoter threshold from dynamic range

1 reference

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21 June 2018

Nucleosome organization in the Drosophila genome.

1 reference

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21 June 2018

Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Transcription regulation through promoter-proximal pausing of RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells

1 reference

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21 June 2018

Genome-wide mapping of allele-specific protein-DNA interactions in human cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Dynamic regulation of nucleosome positioning in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae

1 reference

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21 June 2018

A dermal HOX transcriptional program regulates site-specific epidermal fate

1 reference

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21 June 2018

High-resolution mapping and characterization of open chromatin across the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Genomic sequence is highly predictive of local nucleosome depletion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Chromatin remodelling at promoters suppresses antisense transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The plant homeodomain finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Widespread monoallelic expression on human autosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A plant homeodomain in RAG-2 that binds Hypermethylated lysine 4 of histone H3 is necessary for efficient antigen-receptor-gene rearrangement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

SMRT-mediated repression of an H3K27 demethylase in progression from neural stem cell to neuron

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Methylation of histone H3R2 by PRMT6 and H3K4 by an MLL complex are mutually exclusive

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A high-resolution atlas of nucleosome occupancy in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A histone H3 lysine 27 demethylase regulates animal posterior development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Active and repressive chromatin are interspersed without spreading in an imprinted gene cluster in the mammalian genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Epigenetic characterization of hematopoietic stem cell differentiation using miniChIP and bisulfite sequencing analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A chromatin landmark and transcription initiation at most promoters in human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Nucleosome positioning signals in genomic DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Genome-wide analysis of KAP1 binding suggests autoregulation of KRAB-ZNFs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

High-resolution profiling of histone methylations in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Rules and regulation in the primary structure of chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

On the use of the word 'epigenetic'.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Opposing LSD1 complexes function in developmental gene activation and repression programmes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

H2A.Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Histone replacement marks the boundaries of cis-regulatory domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Histone H3-K56 acetylation is catalyzed by histone chaperone-dependent complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Transcription through chromatin by RNA polymerase II: histone displacement and exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

X chromosome repression by localization of the C. elegans dosage compensation machinery to sites of transcription initiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Dynamic Regulation of Histone Lysine Methylation by Demethylases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Defining an epigenetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Polycomb/Trithorax response elements and epigenetic memory of cell identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Transcription of bxd noncoding RNAs promoted by trithorax represses Ubx in cis by transcriptional interference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Yng1 PHD Finger Binding to H3 Trimethylated at K4 Promotes NuA3 HAT Activity at K14 of H3 and Transcription at a Subset of Targeted ORFs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Antisense transcription controls cell fate in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymerase II elongation

1 reference

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21 June 2018

Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection.

1 reference

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21 June 2018

Proline isomerization of histone H3 regulates lysine methylation and gene expression

1 reference

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21 June 2018

Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

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21 June 2018

Anatomic demarcation by positional variation in fibroblast gene expression programs

1 reference

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21 June 2018

A genomic code for nucleosome positioning

1 reference

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21 June 2018

Antagonistic forces that position nucleosomes in vivo.

1 reference

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21 June 2018

DNase-chip: a high-resolution method to identify DNase I hypersensitive sites using tiled microarrays

1 reference

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21 June 2018

Suz12 binds to silenced regions of the genome in a cell-type-specific manner

1 reference

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21 June 2018

ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression

1 reference

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21 June 2018

Noise in protein expression scales with natural protein abundance

1 reference

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21 June 2018

Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

1 reference

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21 June 2018

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

1 reference

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21 June 2018

Polycomb complexes repress developmental regulators in murine embryonic stem cells

1 reference

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21 June 2018

A high-resolution map of transcription in the yeast genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax

1 reference

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21 June 2018

Histone H4-K16 acetylation controls chromatin structure and protein interactions

1 reference

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21 June 2018

Dynamic regulation of replication independent deposition of histone H3 in fission yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex

1 reference

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21 June 2018

Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The Set1 methyltransferase opposes Ipl1 aurora kinase functions in chromosome segregation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Genome-wide map of nucleosome acetylation and methylation in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Single-nucleosome mapping of histone modifications in S. cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A high-resolution map of active promoters in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Genome-scale identification of nucleosome positions in S. cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Global and Hox-specific roles for the MLL1 methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

X-chromosome inactivation: a hypothesis linking ontogeny and phylogeny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Intergenic transcription through a polycomb group response element counteracts silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Global nucleosome occupancy in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Gene loops juxtapose promoters and terminators in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

In vitro assembly of the characteristic chromatin organization at the yeast PHO5 promoter by a replication-independent extract system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

A Snf2 family ATPase complex required for recruitment of the histone H2A variant Htz1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Transcription elongation factors repress transcription initiation from cryptic sites.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Local spreading of MSL complexes from roX genes on the Drosophila X chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Crosstalk between CARM1 methylation and CBP acetylation on histone H3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Establishment of transcriptional competence in early and late S phase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Long-range chromatin regulatory interactions in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Cellular memory and the histone code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Active genes are tri-methylated at K4 of histone H3

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Diversity, topographic differentiation, and positional memory in human fibroblasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

An ectopic human XIST gene can induce chromosome inactivation in postdifferentiation human HT-1080 cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Epigenomics and epigenetic therapy of cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Kinetics of core histones in living human cells: little exchange of H3 and H4 and some rapid exchange of H2B.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Histone acetylation and an epigenetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Redundant roles for the TFIID and SAGA complexes in global transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The language of covalent histone modifications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Crystal structure of the nucleosome core particle at 2.8 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Decoding the nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Regular arrangement of nucleosomes on 5S rRNA genes in Xenopus laevis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Spheroid chromatin units (v bodies).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

The structure of an oligo(dA).oligo(dT) tract and its biological implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Statistical distributions of nucleosomes: nonrandom locations by a stochastic mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Nuclease hypersensitive regions with adjacent positioned nucleosomes mark the gene boundaries of the PHO5/PHO3 locus in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

21 June 2018

Polycomb repressive complex 2 is dispensable for maintenance of embryonic stem cell pluripotency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

MSL complex is attracted to genes marked by H3K36 trimethylation using a sequence-independent mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

High-throughput mapping of the chromatin structure of human promoters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

SAS-mediated acetylation of histone H4 Lys 16 is required for H2A.Z incorporation at subtelomeric regions in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Genome-scale profiling of histone H3.3 replacement patterns.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Evidence for nucleosome depletion at active regulatory regions genome-wide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Mapping global histone acetylation patterns to gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Identification and distinct regulation of yeast TATA box-containing genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Dynamics of Replication-Independent Histone Turnover in Budding Yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2811691

30 October 2018

Nucleosome positions predicted through comparative genomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/19317649

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Continuous histone H2B and transcription-dependent histone H3 exchange in yeast cells outside of replication

1 reference

https://pubmed.ncbi.nlm.nih.gov/19317649

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nonrandom alignment of nucleosomes on 5S RNA genes of X. laevis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19317649

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/19317649

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1146/ANNUREV.BIOCHEM.78.071107.134639

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

ResearchGate publication ID

0 references

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