(Q30652771)

13 October 2017

Maximizing peptide identification events in proteomic workflows using data-dependent acquisition (DDA). (English)

1 reference

13 October 2017

1 reference

Michael J MacCoss

1 reference

13 October 2017

Nicholas W Bateman

1 reference

13 October 2017

Scott P Goulding

1 reference

13 October 2017

Nicholas J Shulman

1 reference

13 October 2017

Avinash K Gadok

1 reference

13 October 2017

Karen K Szumlinski

1 reference

13 October 2017

Christine C Wu

1 reference

13 October 2017

2 July 2013

1 reference

Molecular & Cellular Proteomics

13 October 2017

1 reference

13 October 2017

1 reference

13 October 2017

1 reference

13 October 2017

329-338

1 reference

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

13 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Topograph, a software platform for precursor enrichment corrected global protein turnover measurements

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Phosphoproteomic analysis of leukemia cells under basal and drug-treated conditions identifies markers of kinase pathway activation and mechanisms of resistance.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Platform-independent and label-free quantitation of proteomic data using MS1 extracted ion chromatograms in skyline: application to protein acetylation and phosphorylation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Less label, more free: approaches in label-free quantitative mass spectrometry.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Hemoglobin depletion from plasma: considerations for proteomic discovery in sickle cell disease and other hemolytic processes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Defining central themes in breast cancer biology by differential proteomics: conserved regulation of cell spreading and focal adhesion kinase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Comparison of database search strategies for high precursor mass accuracy MS/MS data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Retention time alignment algorithms for LC/MS data must consider non-linear shifts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Haemolysis: an overview of the leading cause of unsuitable specimens in clinical laboratories

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

A key role for diacylglycerol lipase-alpha in metabotropic glutamate receptor-dependent endocannabinoid mobilization.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

The Homer family proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Analysis of peptide MS/MS spectra from large-scale proteomics experiments using spectrum libraries

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Systematical evaluation of the effects of sample collection procedures on low-molecular-weight serum/plasma proteome profiling

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

The human plasma proteome: a nonredundant list developed by combination of four separate sources

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Statistical significance for genomewide studies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Homer 2 tunes G protein-coupled receptors stimulus intensity by regulating RGS proteins and PLCbeta GAP activities

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Dynamin 3 is a component of the postsynapse, where it interacts with mGluR5 and Homer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Shotgun proteomics: tools for the analysis of complex biological systems

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Red blood cell hemolysis during processing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

The presynaptic particle web: ultrastructure, composition, dissolution, and reconstitution

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Coupling of mGluR/Homer and PSD-95 complexes by the Shank family of postsynaptic density proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Shank, a novel family of postsynaptic density proteins that binds to the NMDA receptor/PSD-95/GKAP complex and cortactin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Homer binds a novel proline-rich motif and links group 1 metabotropic glutamate receptors with IP3 receptors

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Homer regulates the association of group 1 metabotropic glutamate receptors with multivalent complexes of homer-related, synaptic proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Novel members of the Vesl/Homer family of PDZ proteins that bind metabotropic glutamate receptors

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3879624

Mass spectrometry in high-throughput proteomics: ready for the big time.

20 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Signal maps for mass spectrometry-based comparative proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Informatics platform for global proteomic profiling and biomarker discovery using liquid chromatography-tandem mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Proteomic comparison of two fractions derived from the transsynaptic scaffold.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Semi-supervised learning for peptide identification from shotgun proteomics datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Multicenter evaluation of the hemolysis index in automated clinical chemistry systems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Quantitative profile of five murine core proteomes using label-free functional proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Highly Efficient Depletion Strategy for the Two Most Abundant Erythrocyte Soluble Proteins Improves Proteome Coverage Dramatically

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Utility of Accurate Mass Tags for Proteome-Wide Protein Identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M112.026500

Methods for measuring plasma hemoglobin in micromolar concentration compared

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23820513

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

An accurate mass tag strategy for quantitative and high-throughput proteome measurements

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23820513

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/MCP.M112.026500

1 reference

13 October 2017

1 reference

13 October 2017

PubMed publication ID

23820513

1 reference