(Q28314975)

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Nandita Garud

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Jonathan M Flowers

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Samara Rubinstein

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Andy Reynolds

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Pu Huang

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Scott Jackson

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Adam R Boyko

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Michael D Purugganan

Proceedings of the National Academy of Sciences of the United States of America

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language of work or name

English

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publication date

17 May 2011

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published in

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volume

108

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issue

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page(s)

8351-6

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cites work

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Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa

20 March 2017

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Genetic structure and diversity in Oryza sativa L

20 March 2017

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Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

20 March 2017

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Evidence of three maternal lineages in Near Eastern sheep supporting multiple domestication events

20 March 2017

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Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL

20 March 2017

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Bayesian inference of species trees from multilocus data

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Gene tree discordance, phylogenetic inference and the multispecies coalescent

7 April 2017

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The map-based sequence of the rice genome

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Delimiting species without monophyletic gene trees

7 April 2017

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Molecular Evolution of the Endosperm Starch Synthesis Pathway Genes in Rice (Oryza sativa L.) and Its Wild Ancestor, O. rufipogon L

9 May 2017

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Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genome

29 September 2017

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The origin and evolution of fragrance in rice (Oryza sativa L.).

29 September 2017

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Evolutionary history of GS3, a gene conferring grain length in rice

29 September 2017

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Coalescent methods for estimating phylogenetic trees

29 September 2017

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The nature of selection during plant domestication

29 September 2017

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The genetic expectations of a protracted model for the origins of domesticated crops

29 September 2017

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Nonindependent domestication of the two rice subspecies, Oryza sativa ssp. indica and ssp. japonica, demonstrated by multilocus microsatellites

29 September 2017

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Analysis of 142 genes resolves the rapid diversification of the rice genus

29 September 2017

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Genetics and phylogenetics of rice domestication

29 September 2017

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Genome-wide patterns of nucleotide polymorphism in domesticated rice

29 September 2017

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Global dissemination of a single mutation conferring white pericarp in rice

29 September 2017

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Inconsistency of phylogenetic estimates from concatenated data under coalescence

29 September 2017

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Genetic evidence for a second domestication of barley (Hordeum vulgare) east of the Fertile Crescent

29 September 2017

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Genomic variation in rice: genesis of highly polymorphic linkage blocks during domestication

29 September 2017

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Multiple origins of cultivated grapevine (Vitis vinifera L. ssp. sativa) based on chloroplast DNA polymorphisms

29 September 2017

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Rice domestication by reducing shattering

29 September 2017

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Rapid recent growth and divergence of rice nuclear genomes

29 September 2017

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Phylogenetic relationships among domesticated and wild species of Cucurbita (Cucurbitaceae) inferred from a mitochondrial gene: Implications for crop plant evolution and areas of origin

29 September 2017

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Evidence for two independent domestications of cattle.

29 September 2017

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Genetic analysis of rice domestication syndrome with the wild annual species, Oryza nivara

29 September 2017

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Polyphyletic origin of cultivated rice: based on the interspersion pattern of SINEs

21 January 2018

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Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.).

21 January 2018

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https://api.crossref.org/works/10.1073%2FPNAS.1104686108

Control of a key transition from prostrate to erect growth in rice domestication

21 January 2018

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https://api.crossref.org/works/10.1073%2FPNAS.1104686108

Declining oaks, increasing artistry, and cultivating rice: the environmental and social context of the emergence of farming in the Lower Yangtze Region

21 January 2018

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https://api.crossref.org/works/10.1073%2FPNAS.1104686108

Species trees from highly incongruent gene trees in rice.

21 January 2018

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https://api.crossref.org/works/10.1073%2FPNAS.1104686108

Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice

21 January 2018

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https://api.crossref.org/works/10.1073%2FPNAS.1104686108

Does gene flow destroy phylogenetic signal? The performance of three methods for estimating species phylogenies in the presence of gene flow

21 January 2018

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https://api.crossref.org/works/10.1073%2FPNAS.1104686108

Selection on grain shattering genes and rates of rice domestication

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1104686108

The evolving story of rice evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1104686108

Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes

21 January 2018

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12 December 2020

Genetic diversity and evolutionary relationships in genus Oryza revealed by using highly variable regions of chloroplast DNA

1 reference

12 December 2020

Don't forget the ancestral polymorphisms

1 reference

12 December 2020

Large-scale DNA polymorphism study of Oryza sativa and O. rufipogon reveals the origin and divergence of Asian rice

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.1104686108

1 reference

release_6o42eej6hffktgej6m3ipcne5a

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611866

1 reference

1 reference

611866

PubMed publication ID

21536870

1 reference