(Q28240753)

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The nucleosome: from genomic organization to genomic regulation

scientific article (publication date: 23 January 2004)

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The nucleosome: from genomic organization to genomic regulation (English)

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Sepideh Khorasanizadeh

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23 January 2004

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116

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259-72

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The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly

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The crystal structure of AF1521 a protein from Archaeoglobus fulgidus with homology to the non-histone domain of macroH2A

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The nucleosomal core histone octamer at 3.1 A resolution: a tripartite protein assembly and a left-handed superhelix

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Structural analysis of the RSC chromatin-remodeling complex

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Nucleosomes and subnucleosomes: heterogeneity and composition

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Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

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Histone methylation: dynamic or static?

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Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

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Histone methylation by the Drosophila epigenetic transcriptional regulator Ash1.

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DNA methylation patterns and epigenetic memory

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Nucleosomes unfold completely at a transcriptionally active promoter.

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Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase

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A novel chromatin protein, distantly related to histone H2A, is largely excluded from the inactive X chromosome

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AdoMet-dependent methylation, DNA methyltransferases and base flipping

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Signaling to chromatin through histone modifications

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Structural Basis for Histone and Phosphohistone Binding by the GCN5 Histone Acetyltransferase

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Histone macroH2A1 is concentrated in the inactive X chromosome of female mammals

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Pulling a single chromatin fiber reveals the forces that maintain its higher-order structure

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Deubiquitination of histone H2B by a yeast acetyltransferase complex regulates transcription.

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Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution

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Structure and ligand of a histone acetyltransferase bromodomain

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Phosphorylation and an ATP-dependent process increase the dynamic exchange of H1 in chromatin

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Distinct strategies to make nucleosomal DNA accessible

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H1 linker histones are essential for mouse development and affect nucleosome spacing in vivo

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Chromatin remodeling in vivo: evidence for a nucleosome sliding mechanism

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Solenoidal model for superstructure in chromatin

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Molecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomains

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Binary switches and modification cassettes in histone biology and beyond.

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Mechanisms for nucleosome mobilization

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The methyl-CpG-binding protein MeCP2 links DNA methylation to histone methylation

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Crystal structure and functional analysis of a nucleosome recognition module of the remodeling factor ISWI

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Asymmetries in the nucleosome core particle at 2.5 A resolution

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X-ray diffraction analysis of crystals containing twofold symmetric nucleosome core particles.

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Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.

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Histone acetylation and deacetylation in yeast

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An epigenetic road map for histone lysine methylation

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Crystal structure of the nucleosome core particle at 2.8 A resolution

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Structure of the catalytic domain of human DOT1L, a non-SET domain nucleosomal histone methyltransferase

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Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27

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Dynamic binding of histone H1 to chromatin in living cells

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1 reference

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based on heuristic

inferred from DOI database lookup

The structure of DNA in the nucleosome core

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

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based on heuristic

inferred from DOI database lookup

Structure of the nucleosome core particle at 7 Å resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Crystals of a nucleosome core particle containing defined sequence DNA

1 reference

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based on heuristic

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DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139

1 reference

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based on heuristic

inferred from DOI database lookup

Histone acetyltransferases

1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

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1 reference

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based on heuristic

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1 reference

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based on heuristic

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1 reference

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based on heuristic

inferred from DOI database lookup

Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

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based on heuristic

inferred from DOI database lookup

Structural analysis of the yeast SWI/SNF chromatin remodeling complex.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

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High-resolution X-ray and NMR structures of the SMN Tudor domain: conformational variation in the binding site for symmetrically dimethylated arginine residues

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based on heuristic

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Regulation of chromatin remodeling by inositol polyphosphates

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

The language of covalent histone modifications

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7 January 2021

based on heuristic

inferred from DOI database lookup

Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

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based on heuristic

inferred from DOI database lookup

Crystal structure of a nucleosome core particle containing the variant histone H2A.Z

1 reference

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7 January 2021

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inferred from DOI database lookup

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1 reference

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based on heuristic

inferred from DOI database lookup

MAP kinase-mediated signalling to nucleosomes and immediate-early gene induction

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Higher-order structure of chromatin and chromosomes

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Transcriptional regulation by histone ubiquitination and deubiquitination.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails

1 reference

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7 January 2021

based on heuristic

inferred from DOI database lookup

Structure of the Predominant Protein Arginine Methyltransferase PRMT1 and Analysis of Its Binding to Substrate Peptides

1 reference

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7 January 2021

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inferred from DOI database lookup

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1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Structural basis for the product specificity of histone lysine methyltransferases

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

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Structure of the Yeast Hst2 Protein Deacetylase in Ternary Complex with 2′-O-Acetyl ADP Ribose and Histone Peptide

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Position and orientation of the globular domain of linker histone H5 on the nucleosome.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900044-3

7 January 2021

based on heuristic

inferred from DOI database lookup

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