(Q28131736)

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Prediction of the Secondary Structure of Proteins from their Amino Acid Sequence

scientific article published on January 1, 1978

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Europe PubMed Central

Prediction of the secondary structure of proteins from their amino acid sequence (English)

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protein structure prediction

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protein structure

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amino acid sequence

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A364941

8 April 2023

author name string

Peter Y. Chou

1

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Gerald D. Fasman

2

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P. Y. Chou

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A364941

8 April 2023

G. D. Fasman

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A364941

8 April 2023

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publication date

1978

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22 November 2006

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full work available at URL

https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2F9780470122921.ch2

1 reference

10.1002/9780470122921.CH2

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8 April 2023

https://onlinelibrary.wiley.com/doi/full/10.1002/9780470122921.ch2

1 reference

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8 April 2023

Advances in Enzymology and Related Areas of Molecular Biology

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47

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45-148

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Comparison of the predicted and observed secondary structure of T4 phage lysozyme

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Chain reversals in proteins

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Analysis of Conformations of Amino Acid Residues and Prediction of Backbone Topography in Proteins

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21 January 2018

Analysis of code relating sequences to conformation in globular proteins. Theory and application of expected information

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Analysis of the code relating sequence to conformation in globular proteins. Development of a stereochemical alphabet on the basis of intra-residue information

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Analysis of the code relating sequence to conformation in globular proteins. An informational analysis of the role of the residue in determining the conformation of its neighbours in the primary sequence

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Analysis of the code relating sequence to conformation in globular proteins. The distribution of residue pairs in turns and kinks in the backbone chain

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Pancreatic Trypsin Inhibitor (Kunitz): Part I: Structure and function

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An assessment of protein secondary structure prediction methods based on amino acid sequence

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Conformational studies of corticotropin1–32 and constitutive peptides by circular dichroism

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The prediction of the conformation of membrane proteins from the sequence of amino acids

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Iso-cytochrome c species from baker's yeast. Analysis of their circular-dichroism spectra

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The Structure of Cytochrome b5 at 2.0 A Resolution

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Crystallographic refinement of the structure of bovine pancreatic trypsin inhibitor at l.5 Å resolution

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The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain

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Role of proline in polypeptide chain configuration of proteins

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A CORRELATION BETWEEN AMINO ACID COMPOSITION AND PROTEIN STRUCTURE.

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A study of the correlation between the amino acid composition and the helical content of proteins

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Relation of amino acid composition and the moffitt parameters to the secondary structure of proteins

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Structure of myoglobin: A three-dimensional Fourier synthesis at 2 A. resolution

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Structure of haemoglobin: a three-dimensional Fourier synthesis at 5.5-A. resolution, obtained by X-ray analysis

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Amino-Acid Sequence of Sperm Whale Myoglobin

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THE HEMOGLOBINS

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The influence of amino-acid sequence on protein structure

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Correlation between the distribution of amino acids and alpha helices

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Recognition of alpha-helical segments in proteins of known primary structure

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Prediction of alpha-helical regions in proteins of known sequence

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The influence of short-range interactions on protein onformation. II. A model for predicting the alpha-helical regions of proteins

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Use of helical wheels to represent the structures of proteins and to identify segments with helical potential

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Theory of the Phase Transition between Helix and Random Coil in Polypeptide Chains

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Helix probability profiles of denatured proteins and their correlation with native structures

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Predictions of structural homologies in cytochrome c proteins

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An attempt to locate the non-helical and permissively helical sequences of proteins: application to the variable regions of immunoglobulin light and heavy chains

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An attempt to evaluate the influence of neighboring amino acids (n-1) and (n+1) on the backbone conformation of amino acid (n) in proteins. Use in predicting the three-dimensional structure of the polypeptide backbone of other proteins

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Analysis of the code relating sequence to conformation in proteins: Possible implications for the mechanism of formation of helical regions

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Statistical analysis of the correlation among amino acid residues in helical, beta-structural and non-regular regions of globular proteins

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Structure of crystalline -chymotrypsin. V. The atomic structure of tosyl- -chymotrypsin at 2 A resolution

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Three-dimensional Structure of Tosyl-elastase

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The Covalent and Three-Dimensional Structure of Concanavalin A

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Logical analysis of the mechanism of protein folding. I. Predictions of helices, loops and beta-structures from primary structure

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The influence of nearest-neighboring amino acid residues on aspects of secondary structure of proteins. Attempts to locate ?-helices and ?-sheets

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The influence of nearest-neighbor amino acids on the conformation of the middle amino acid in proteins: comparison of predicted and experimental determination of -sheets in concanavalin A.

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Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

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Three-Dimensional Structure of Hemoglobin from the Polychaete Annelid, Glycera dibranchiata, at 2.5 A Resolution

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IUPAC-IUB Commission on Biochemical Nomenclature. Abbreviations and symbols for the description of the conformation of polypeptide chains. Tentative rules (1969)

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A Second Right-handed Helical Structure with the Parameters of the Pauling–Corey α-helix

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Protein folding

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The Reverse Turn as a Polypeptide Conformation in Globular Proteins

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The relation between amino acid sequence and protein conformation

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Studies on the Conformation of Glucagon

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Evidence for the compact conformation of monomeric glucagon. Hydrogen-tritium exchange studies

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Conformational nature of monomeric glucagon

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X-ray analysis of glucagon and its relationship to receptor binding

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Brookhaven symposia in biology

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15

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Kendrew

publication date

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Analysis of the primary sequence of α-tropomyosin from rabbit skeletal muscle

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Primary structure of ribosomal protein S6 from the wild type and a mutant of Escherichia coli

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Primary structure of protein S18 from the small Escherichia coli ribosomal subunit

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120

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8 April 2023

Determination of the amino-acid sequence of the ribosomal protein S8 of Escherichia coli

121

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8 April 2023

Primary structure of protein S20 from the small ribosomal subunit of Escherichia coli

122

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8 April 2023

Primary structure of protein L33 from the large subunit of the Escherichia coli ribosome

123

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8 April 2023

Primary structure of the 16S rRNA binding protein S15 from Escherichia coli ribosomes

124

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8 April 2023

The primary structure of the 5 S RNA binding protein L5 of Escherichia coli ribosomes

125

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8 April 2023

Relationship between α-helical propensity and formation of the ribonuclease-S complex

126

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8 April 2023

Transcarboxylase: role of biotin, metals, and subunits in the reaction and its quaternary structure

127

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8 April 2023

Somatostatin conformation: evidence for a stable intramolecular structure from circular dichroism, diffusion, and sedimentation equilibrium

128

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8 April 2023

Conformation and unfolding thermodynamics of epidermal growth factor and derivatives

129

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8 April 2023

Hemerythrin: Alternative Oxygen Carrier

130

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8 April 2023

Conformational study of alpha1-acid glycoprotein

131

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8 April 2023

Carbohydrate-peptide linkage in glycoproteins.

132

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8 April 2023

Prediction of the secondary and tertiary structure of plastocyanin

133

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8 April 2023

beta Structure of aqueous staphylococcal enterotoxin B by spectropolarimetry and sequence-based conformational predictions

134

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8 April 2023

Mutational amino acid replacements in Neurospora crassa NADP-specific glutamate dehydrogenase

135

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8 April 2023

Predicted structure for aldolase

136

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8 April 2023

Structure of chicken muscle triose phosphate isomerase determined crystallographically at 2.5Å resolution: using amino acid sequence data

137

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8 April 2023

Evidence for a major conformational change of coat protein in assembly of fl bacteriophage

138

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8 April 2023

Three dimensional structure of erabutoxin b neurotoxic protein: inhibitor of acetylcholine receptor

139

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8 April 2023

Prediction of the amount of secondary structure in a globular protein from its aminoacid composition

140

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8 April 2023

Prediction of the secondary structure of proteins using the helix-coil transition theory

141

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8 April 2023

Letter: Mechanisms of protein and polypeptide helix initiation

142

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8 April 2023

Directional Information Transfer in Protein Helices

149

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8 April 2023

Assessment of some problems associated with prediction of the three-dimensional structure of a protein from its amino-acid sequence

150

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8 April 2023

Logical analysis of the mechanism of protein folding II. The nucleation process

151

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8 April 2023

Logical analysis of the mechanism of protein folding III. Prediction of the strong long-range interactions

152

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8 April 2023

Energy refinement of hen egg-white lysozyme

153

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8 April 2023

Refinement of the x-ray structure of lysozyme by complete energy minimization

154

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8 April 2023

The structural code for proteins: zonal distribution of amino acid residues and stabilization of helices by hydrophobic triplets.

155

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8 April 2023

Structural principles of the globular organization of protein chains. A stereochemical theory of globular protein secondary structure.

156

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8 April 2023

Algorithms for prediction of alpha-helical and beta-structural regions in globular proteins

157

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8 April 2023

A theory of protein molecule self-organization. IV. Helical and irregular local structures of unfolded protein chains

158

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8 April 2023

Comparison of predicted and experimentally determined secondary structure of adenyl kinase

159

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8 April 2023

Further comparison of predicted and experimentally determined structure of adenylate kinase

160

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8 April 2023

The Three Dimensional Structure of the Lysozyme from Bacteriophage T4

161

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8 April 2023

Secondary structure of tobacco mosaic virus protein

162

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8 April 2023

Statistical Mechanical Treatment of Protein Conformation. III. Prediction of Protein Conformation Based on a Three-State Model

164

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8 April 2023

Three-dimensional structure of Escherichia coli thioredoxin-S2 to 2.8 A resolution

167

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8 April 2023

Thioredoxin. 6. The Amino Acid Sequence of the Protein from Escherichia coli B

168

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8 April 2023

Atomic models for the polypeptide backbones of myohemerythrin and hemerythrin

169

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8 April 2023

Alpha-carbon coordinates for bovine Cu,Zn superoxide dismutase

170

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8 April 2023

Homology of protein structures: proteinase inhibitors

172

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8 April 2023

The two-disulphide intermediates and the folding pathway of reduced pancreatic trypsin inhibitor

174

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8 April 2023

Interactions between cysteine residues as probes of protein conformation: The bisulphide bond between Cys-14 and Cys-38 of the pancreatic trypsin inhibitor

175

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8 April 2023

Structure of the complex formed by bovine trypsin and bovine pancreatic trypsin inhibitor. Crystal structure determination and stereochemistry of the contact region

176

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8 April 2023

The Effect of Neighboring Charges on the Helix Forming Ability of Charged Amino Acids in Proteins

178

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8 April 2023

Prediction of the conformation of the histones

180

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8 April 2023

The predicted structure of the calcium-binding component of troponin

182

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8 April 2023

Nucleation, rapid folding, and globular intrachain regions in proteins

183

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8 April 2023

Stereochemistry of polypeptide chain configurations

184

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8 April 2023

Letter: Recognition of structural domains in globular proteins

188

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8 April 2023

Chemical and biological evolution of nucleotide-binding protein

189

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8 April 2023

Similarity of three-dimensional structure between the immunoglobulin domain and the copper, zinc superoxide dismutase subunit

191

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8 April 2023

Structural patterns in globular proteins

192

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8 April 2023

A two-dimensional representation of protein structures

193

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8 April 2023

Approach to the tertiary structure of globular proteins

194

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8 April 2023

Handedness of crossover connections in beta sheets

195

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8 April 2023

On the conformation of proteins: the handedness of the beta-strand-alpha-helix-beta-strand unit

196

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8 April 2023

Folding of polypeptide chains induced by the amino acid side-chains

197

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8 April 2023

Model of protein folding: inclusion of short-, medium-, and long-range interactions

198

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8 April 2023

A model of myoglobin self-organization

199

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8 April 2023

Computer simulation of protein folding

200

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8 April 2023

Folding and stability of helical proteins: carp myogen

201

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8 April 2023

Protein-folding dynamics

202

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8 April 2023

An easy method for retrieving atomic coordinates from CPK space-filling molecular models

203

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8 April 2023

Calculation of protein tertiary structure

204

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8 April 2023

The information content of protein amino acid sequences

205

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8 April 2023

Experimental and Theoretical Aspects of Protein Folding

206

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8 April 2023

Extended helical conformation newly observed in protein folding

207

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8 April 2023

Topography of human plasma α1-acid glycoprotein

208

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8 April 2023

Circular dichroism and optical rotatory dispersion of the aggregates of purified polypeptides of alpha-crystallin.

211

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8 April 2023

Interaction of Apoprotein from Porcine High-Density Lipoprotein with Dimyristoyl Lecithin. 2. Nature of Lipid-Protein Interaction

213

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8 April 2023

Human High Density Apolipoprotein A-I-Lysolecithin-Lecithin and Sphingomyelin Complexes. A Method for High Yield Recombinations to Lipoprotein Complexes of Reproducible Stoichiometry

214

1 reference

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8 April 2023

Covalent structure of apolipoprotein A-II from Macaca mulatta serum high-density lipoproteins

215

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8 April 2023

Primary structure and sidechain interactions of PFL filamentous bacterial virus coat protein

217

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8 April 2023

Studies of virus structure by laser-Raman spectroscopy. II. MS2 phage, MS2 capsids and MS2 RNA in aqueous solutions

219

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8 April 2023

Primary structure of bacteriophage T4 internal protein II and characterization of the cleavage upon phage maturation

220

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8 April 2023

Amino-acid sequence of dihydrofolate reductase from a methotrexate-resistant mutant of Streptococcus faecium and identification of methionine residues at the inhibitor binding site

221

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8 April 2023

The amino acid sequence of the Azotobacter vinelandii flavodoxin

223

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8 April 2023

Intermolecular contacts of deoxyhemoblogin S: A hypothesis and search for possible anti-sickling agents

225

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8 April 2023

On the mechanism of interaction between histone I and DNA and histone III and DNA

226

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8 April 2023

Conformations and interactions of histone H2A (F2A2, ALK)

227

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8 April 2023

Comparison between histones FV and F2a2 of chicken erythrocyte. I. Structure, stability and conformation of the free proteins.

228

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8 April 2023

Ionic strength induced structure in histone H4 and its fragments

229

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8 April 2023

Nuclear magnetic resonance studies on the solution conformation of histone IV fragments obtained by cyanogen bromide cleavage

230

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8 April 2023

Reaction of human chorionic somatomammotropin and human pituitary growth hormone with tetranitromethane at 0 degrees C.

231

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8 April 2023

Structure, Function, and Evolutionary Relationships of Fc Domains of Human Immunoglobulins A, G, M, and E

233

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8 April 2023

The folding and quaternary structure of trimeric 2-keto-3-deoxy-6-phosphogluconic aldolase at 3.5-A resolution

236

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8 April 2023

Predicted secondary structure of the N-terminal sequence of the lac repressor and proposed models for its complexation to the lac operator

237

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8 April 2023

Lipotropin: Precursor to two biologically active peptides

238

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8 April 2023

Biosynthetic origin and receptor conformation of methionine enkephalin

240

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8 April 2023

Structure of the antitumor protein neocarzinostatin. Amino acid sequence

241

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8 April 2023

Prediction of the secondary structure of mouse nerve growth factor and its comparison with insulin

242

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8 April 2023

The molecular structure of the receptor-ionophore complex at the neuromuscular junction

244

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8 April 2023

The conformational protential of porcine proinsulin C-peptide

246

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8 April 2023

Secretin. VI. Simultaneous "in situ" syntheses of three analogues of the C-terminal tricosapeptide and a study of their conformation

249

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8 April 2023

D-Trp8-somatostatin: An analog of somatostatin more potent than the native molecule

251

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8 April 2023

Fragments of bovine serum albumin produced by limited proteolysis. Conformation and ligand binding

253

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8 April 2023

Conformational properties of bovine plasma albumin with a cleaved internal peptide bond

254

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8 April 2023

Amino-Acid Sequence of a Coelenterate Toxin: Toxin II from Anemonia sulcata

255

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8 April 2023

Three-dimensional Fourier synthesis of calf liver cytochrome b 5 at 2-8 A resolution

257

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8 April 2023

Structure of insulin in 4-zinc insulin

261

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8 April 2023

Peptide conformation. Evidence for .beta. structures in solutions of linear tetrapeptides containing proline

263

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8 April 2023

β-turns in proteins

266

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8 April 2023

Structure of the lysozyme from bacteriophage T4: An electron density map at 2.4 Å resolution

267

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8 April 2023

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10.1002/9780470122921.CH2

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1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

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