(Q24563500)

19 October 2023

Alex Coventry

Alex

Coventry

1 reference

15304649

19 October 2023

Daniel J Kleitman

series ordinal

author given names

Daniel J

author last names

Kleitman

1 reference

15304649

Proceedings of the National Academy of Sciences of the United States of America

19 October 2023

language of work or name

English

0 references

publication date

17 August 2004

0 references

published in

0 references

volume

101

0 references

issue

0 references

page(s)

12102-7

0 references

cites work

Computational identification of non-coding RNAs in Saccharomyces cerevisiae by comparative genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Prediction of signal recognition particle RNA genes

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

A mRNA-based thermosensor controls expression of rhizobial heat shock genes

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

The distribution of RNA motifs in natural sequences

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

The Ribonuclease P Database

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

RNA sequence analysis using covariance models

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Expression of human alpha-tubulin genes: interspecies conservation of 3' untranslated regions

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Non–coding RNA genes and the modern RNA world

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Basic local alignment search tool

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Prediction of complete gene structures in human genomic DNA

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Prediction of plant microRNA targets

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Secondary structure prediction for aligned RNA sequences

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Dynalign: an algorithm for finding the secondary structure common to two RNA sequences

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

The human XIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

MAVID multiple alignment server

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

The nicking homing endonuclease I-BasI is encoded by a group I intron in the DNA polymerase gene of the Bacillus thuringiensis phage Bastille

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

An expanding universe of noncoding RNAs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA)

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

mRNA localization: message on the move

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

SRPDB (Signal Recognition Particle Database).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Human and mouse gene structure: comparative analysis and application to exon prediction

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

A revision of the human XIST gene organization and structural comparison with mouse Xist

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Identification of a novel cis-element in the 3'-untranslated region of mammalian peptidylglycine alpha-amidating monooxygenase messenger ribonucleic acid

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Gene recognition via spliced sequence alignment.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Sequences responsible for intracellular localization of beta-actin messenger RNA also affect cell phenotype

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Phylogenetic comparative analysis and the secondary structure of ribonuclease P RNA--a review

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

In vivo and in vitro processing of the Bacillus subtilis transcript coding for glutamyl-tRNA synthetase, serine acetyltransferase, and cysteinyl-tRNA synthetase

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

ReAligner: a program for refining DNA sequence multi-alignments.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

ddbRNA: detection of conserved secondary structures in multiple alignments.

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

Fast folding and comparison of RNA secondary structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

Characterization of translational-control ribonucleic acid isolated from embryonic chick muscle

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

The role of the 5' untranslated region (UTR) in glucose-dependent mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

The mle(napts) RNA helicase mutation in drosophila results in a splicing catastrophe of the para Na+ channel transcript in a region of RNA editing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

Methods in comparative genomics: genome correspondence, gene identification and regulatory motif discovery.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514400

5S RNA secondary structure

28 November 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

Autoregulated instability of β-tubulin mRNAs by recognition of the nascent amino terminus of βtubulin

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0404193101

Noncoding RNA gene detection using comparative sequence analysis

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/15304649

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Automatic RNA secondary structure prediction with a comparative approach

1 reference

https://pubmed.ncbi.nlm.nih.gov/15304649

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Influence of the 5'-end region of aldehyde dehydrogenase mRNA on translational efficiency. Potential secondary structure inhibition of translation in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/15304649

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0404193101

1 reference

journals/pnas/CoventryKB04

0 references

1 reference

DBLP Dataset 2021-01-02

release_rchqn4vrfrfhdixqwap2lvfh2y

28 January 2021

Fatcat ID

0 references

1256703

1 reference

1 reference

1256703

15304649

1 reference