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Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome

scientific article published in March 2002

Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome

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Europe PubMed Central

PubMed publication ID

5 August 2017

Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome. (English)

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Europe PubMed Central

PubMed publication ID

5 August 2017

Drosophila melanogaster

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3

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Manolo Gouy

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Europe PubMed Central

PubMed publication ID

5 August 2017

Gabriel A B Marais

2

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Gabriel Marais

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Europe PubMed Central

PubMed publication ID

5 August 2017

author name string

Carène Rizzon

1

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Europe PubMed Central

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5 August 2017

Christian Biémont

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Europe PubMed Central

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5 August 2017

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publication date

1 March 2002

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Europe PubMed Central

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5 August 2017

Genome Research

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Europe PubMed Central

PubMed publication ID

5 August 2017

12

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Europe PubMed Central

PubMed publication ID

5 August 2017

3

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

400-407

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

Structural features of the mdg1 lineage of the Ty3/gypsy group of LTR retrotransposons inferred from the phylogenetic analyses of its open reading frames

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Evolutionary dynamics of microsatellite DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

It takes two transposons to tango: transposable-element-mediated chromosomal rearrangements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposable elements as the key to a 21st century view of evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Recently integrated human Alu repeats: finding needles in the haystack

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposon dynamics and the breeding system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Sure facts, speculations, and open questions about the evolution of transposable element copy number

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Restriction of ectopic recombination by interhomolog interactions during Saccharomyces cerevisiae meiosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Microsatellites in different eukaryotic genomes: survey and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposon diversity in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

The genome sequence of Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Insertion site preferences of the P transposable element in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Plant retrotransposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Interspersed repeats and other mementos of transposable elements in mammalian genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Genome rearrangements by nonlinear transposons in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

The M26 hotspot of Schizosaccharomyces pombe stimulates meiotic ectopic recombination and chromosomal rearrangements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Microsatellites, transposable elements and the X chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Molecular structure of a functional Drosophila centromere

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposable elements as sources of variation in animals and plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Comparative analysis of the chromosomal and genomic organization of Ty1-copia-like retrotransposons in pteridophytes, gymnosperms and angiosperms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Chromosomal distribution of transposable elements in Drosophila melanogaster: test of the ectopic recombination model for maintenance of insertion site number

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

The efficiency of meiotic recombination between dispersed sequences in Saccharomyces cerevisiae depends upon their chromosomal location.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Drosophila telomeres: new views on chromosome evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Microsatellite spreading in the human genome: evolutionary mechanisms and structural implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Meiotic recombination, noncoding DNA and genomic organization in Caenorhabditis elegans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Reduced natural selection associated with low recombination in Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Repetitive DNA sequences located in the terminal portion of the Caenorhabditis elegans chromosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposable element numbers in cosmopolitan inversions from a natural population of Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Codon usage and genome evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Transposable elements are stable structural components of Drosophila melanogaster heterochromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Phylogeny, rates of evolution, and patterns of codon usage among sea urchin retroviral-like elements, with implications for the recognition of horizontal transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

The mosaic genome of warm-blooded vertebrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Human genome organization: Alu, LINES, and the molecular structure of metaphase chromosome bands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Recombination between repeated genes in microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Meiotic recombination between repeated transposable elements in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Genome reshuffling of the copia element in an inbred line of Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Differential distribution of long and short interspersed element sequences in the mouse genome: chromosome karyotyping by fluorescence in situ hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Chromosome rearrangement by ectopic recombination in Drosophila melanogaster: genome structure and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Population genetics of transposable DNA elements. A Drosophila point of view

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

8 July 2018

Codon usage by transposable elements and their host genes in five species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Introduction. Shedding new light on the dark corners of the nucleus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

The distribution of genes in the Drosophila genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Genetic definition and sequence analysis of Arabidopsis centromeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Distribution of dinucleotide microsatellites in the Drosophila melanogaster genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Meiotic synapsis in the absence of recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Transposable element distribution in Drosophila.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Transposable element distributions in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Tracking heterochromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Genetic recombination. Patterns in the genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Chromosomal distribution and population dynamics of the 412 retrotransposon in a natural population of Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Transposable elements in inbreeding and outbreeding populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155295

26 October 2018

Codon usage and the origin of P elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

How valuable are model organisms for transposable element studies?

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Selection against deleterious LINE-1-containing loci in the human lineage

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Local Rates of Recombination Are Positively Correlated with GC Content in the Human Genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosomal distribution of the transposable elements Osvaldo and blanco in original and colonizer populations of Drosophila buzzatii

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transposable element number in mixed mating populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accumulation of P elements in minority inversions in natural populations ofDrosophila melanogaster

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The distribution of transposable elements within and between chromosomes in a population of Drosophila melanogaster. I. Element frequencies and distribution

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The distribution of transposable elements within and between chromosomes in a population of Drosophila melanogaster. II. Inferences on the nature of selection against elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

On the role of unequal exchange in the containment of transposable element copy number

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

REPRODUCTIVE ISOLATION IN RHABDITIDAE (NEMATODA: SECERNENTEA); MECHANISMS THAT ISOLATE SIX SPECIES OF THREE GENERA

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A test for the role of natural selection in the stabilization of transposable element copy number in a population of Drosophila melanogaster

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effect of linkage on limits to artificial selection

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Potential advantages of unstable interactions for pairing of chromosomes in meiotic, somatic, and premeiotic cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The evolutionary dynamics of repetitive DNA in eukaryotes

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The chromosomal distributions of Ty1-copia group retrotransposable elements in higher plants and their implications for genome evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of genes by mammalian retroposons

1 reference

https://pubmed.ncbi.nlm.nih.gov/11875027

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1101/GR.210802

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

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