Molecular phylogenetics and evolution, Feb 23, 2017
Eriophyoid, or four-legged mites, represent a large and ancient radiation of exclusively phytopha... more Eriophyoid, or four-legged mites, represent a large and ancient radiation of exclusively phytophagous organisms known from the Triassic (230 Mya). Hypothesizing phylogenetic relatedness of Eriophyoidea among mites is a major challenge due to the absence of unambiguous morphological synapomorphies, resulting in ten published hypotheses placing eriophyoids in various places in the acariform tree of life. Here we test the evolutionary relationships of eriophyoids using six genes and a representative taxonomic sampling of acariform mites. The total evidence analysis places eriophyoids as the sister group of the deep soil-dwelling, vermiform family Nematalycidae (Endeostigmata). This arrangement was supported by the rDNA and CO1 partitions. In contrast, the nuclear protein partition (genes EF1-α, SRP54, HSP70) suggests that Eriophyoidea is sister to a lineage including Tydeidae, Ereynetidae, and Eupodidae (Eupodina: Trombidiformes). On both of these alternative topologies, eriophyoids ap...
Background Acariformes is the most species-rich and morphologically diverse radiation of chelicer... more Background Acariformes is the most species-rich and morphologically diverse radiation of chelicerate arthropods, known from the oldest terrestrial ecosystems. It is also a key lineage in understanding the evolution of this group, with the most vexing question whether mites, or Acari (Parasitiformes and Acariformes) is monophyletic. Previous molecular studies recovered Acari either as monophyletic or non-monophyletic, albeit with a limited taxon sampling. Similarly, relationships between basal acariform groups (include little-known, deep-soil 'endeostigmatan' mites) and major lineages of Acariformes (Sarcoptiformes, Prostigmata) are virtually unknown. We infer phylogeny of chelicerate arthropods, using a large and representative dataset, comprising all main in- and outgroups (228 taxa). Basal diversity of Acariformes is particularly well sampled. With this dataset, we conduct a series of phylogenetically explicit tests of chelicerate and acariform relationships and present a ...
The variation in house dust mite microbial communities is important because various microorganism... more The variation in house dust mite microbial communities is important because various microorganisms modulate the production of allergens by their mite hosts and/or contaminate immunotherapeutic extracts. Temporal changes in mite microbiomes and the mite culture environment occurring at different stages of mite culture development are particularly understudied in this system. Here, we analyzed the dynamics of microbial communities during the culture growth of Dermatophagoides farinae. Changes in microbiomes were related to three key variables: the mite population density, microbial microcosm respiration, and concentration of guanine (the mite nitrogenous waste metabolite). Mite populations exhibited the following phases: exponential growth, plateau, and exponential decline. The intracellular bacterium Cardinium and the yeast Saccharomyces cerevisiae prevailed in the internal mite microbiomes, and the bacterium Lactobacillus fermentum was prevalent in the mite diet. The reduction in th...
We describe two new species and report new occurrences for six species of eriophyid mites (Erioph... more We describe two new species and report new occurrences for six species of eriophyid mites (Eriophyoidea: Eriophyidae) in Crimea: Abacarus denticulifer n. sp. from Agropyron cristatum (L.) Gaertn. (Poaceae), Aceria aculiformis Sukhareva 1986 from Melica ciliata L. (Poaceae), Aceria peucedani (Canestrini 1891) from Seseli tortuosum L. (Apiaceae), Anthocoptes recki (Bagdasarian 1972) n. comb. (from Tegonotus) from Pistacia atlantica subsp. mutica (Fisch. & C.A. Mey.) (Anacardiaceae), Epitrimerus inulae Farkas 1963 from Inula germanica L. (Asteraceae), Phyllocoptes sanctus n. sp. from Potentilla recta subsp. obscura (Willd.) (Rosaceae), Phyllocoptes bilobospinosus Chetverikov 2019 (in Chetverikov et al. 2019) from Tamarix spp. (Tamaricaceae), Tegoprionus dentatus (Nalepa 1891) from Galium verum L. (Rubiaceae). For an Indian phyllocoptine mite species associated with Apluda mutica L. (Poaceae), a new combination was proposed: Abacarus muticus (Sur…
A new vagrant eriophyoid mite species, Setoptus tsugivagus n. sp. Chetverikov (Eriophyoidea, Phyt... more A new vagrant eriophyoid mite species, Setoptus tsugivagus n. sp. Chetverikov (Eriophyoidea, Phytoptidae, Nalepellinae, Nalepellini), is described from the needles of the western hemlock, Tsuga heterophylla (Rafinesque) Sargent (Pinaceae) in Vancouver, Canada. The new species can be distinguished from all other members of Setoptus by a distinct pattern of several short longitudinal ridges on the posterior half of the prodorsal shield. Elements of the anal secretory apparatus (ASA) were observed in adults of S. tsugivagus n. sp., suggesting that the ASA is present in both major phylogenetic lineages of Eriophyoidea (Eriophyidae s. l. and Phytoptidae s. l.). Therefore, this structure could be a synapomorphy for all Eriophyoidea. We briefly discuss the function and morphological variety of the ASA in Eriophyoidea. D2 28S rDNA sequences of four nalepelline species were obtained: Boczekella reticulata Bagnyuk 1987 (GenBank accession number MK124605), Nalepella tsugifoliae Keifer 1953 (MK...
Mites of the genus Tyrophagus (Acari: Acaridae) are among the most widespread and common mites, i... more Mites of the genus Tyrophagus (Acari: Acaridae) are among the most widespread and common mites, inhabiting diverse natural and anthropogenic habitats. Some species are pests of agricultural products and stored food and/or live in house dust, causing allergies to humans. We sequenced 1.2 kb of the mitochondrial COI gene for 38 individuals belonging to seven species of Tyrophagus, including T. curvipenis, T. putrescentiae, T. fanetzhangorum, T. longior, T. perniciosus, and T. cf. similis. Molecular phylogenetic analyses (1) recovered two major clades corresponding to the presence or absence of eyespots, and (2) separated all included morphological species. Tyrophagus curvipenis and T. putrescentiae had the lowest between-species genetic distances (range, mean ± SD): 14.20-16.30, 15.17 ± 0.40 (K2P). The highest within-species variation was found in T. putrescentiae 0.00-4.33, 1.78 ± 1.44 (K2P). In this species, we recovered two distinct groups; however, no geographical or ecological di...
Evolution; international journal of organic evolution, Oct 22, 2017
Inferring cophylogeographic events requires matching the timing of these events on both host and ... more Inferring cophylogeographic events requires matching the timing of these events on both host and symbiont (e.g., parasites) phylogenies because divergences of hosts and their symbionts may not temporally coincide, and host switches may occur. We investigate a large radiation of birds (Passeriformes) and their permanent symbionts, the proctophyllodid feather mites (117 species from 116 bird species; six genes, 11,468 nt aligned) using two time-calibration strategies for mites: fossils only and host phylogeography only. Out of 10 putative cophylogeographic events 4 agree in timing for both symbiont and host events being synchronous co-origins or codispersals; three were based on host shifts, but agree in timing being very close to the origin of modern hosts; two disagree; and one large basal mite split was seemingly independent from host phylogeography. Among these events was an ancient (21-25.3 Mya), synchronous codispersal from the Old World leading to the origin and diversification...
We describe Tuccioglyphus setosus gen. et sp. nov. from the litter of commercially reared laying ... more We describe Tuccioglyphus setosus gen. et sp. nov. from the litter of commercially reared laying hens as well as wild birds in Brazil. The new genus Tuccioglyphus presents a mixture of character states between the two conventional subfamilies, Pyroglyphinae and Dermatophagoidinae. Based on this new unusual genus, we discuss character states delimiting these and other major subfamilies of the house dust mite family, Pyroglyphidae, as well as its most important and species-rich genus Dermatophagoides. An additional new genus, Marioglyphus gen. n., is proposed for Hughesiella valerioi Vargas and Smiley. Both Tuccioglyphus and Marioglyphus are related to the genus Hughesiella. A key to pyroglyphid genera of the World is presented.
Tyrophagus putrescentiae colonizes different human-related habitats and feeds on various post-har... more Tyrophagus putrescentiae colonizes different human-related habitats and feeds on various post-harvest foods. The microbiota acquired by these mites can influence the nutritional plasticity in different populations. We compared the bacterial communities of five populations of T. putrescentiae and one mixed population of T. putrescentiae and T. fanetzhangorum collected from different habitats. The bacterial communities of the six mite populations from different habitats and diets were compared by Sanger sequencing of cloned 16S rRNA obtained from amplification with universal eubacterial primers and using bacterial taxon-specific primers on the samples of adults/juveniles or eggs. Microscopic techniques were used to localize bacteria in food boli and mite bodies. The morphological determination of the mite populations was confirmed by analyses of CO1 and ITS fragment genes. The following symbiotic bacteria were found in compared mite populations: Wolbachia (two populations), Cardinium ...
Molecular phylogenetics and evolution, Feb 23, 2017
Eriophyoid, or four-legged mites, represent a large and ancient radiation of exclusively phytopha... more Eriophyoid, or four-legged mites, represent a large and ancient radiation of exclusively phytophagous organisms known from the Triassic (230 Mya). Hypothesizing phylogenetic relatedness of Eriophyoidea among mites is a major challenge due to the absence of unambiguous morphological synapomorphies, resulting in ten published hypotheses placing eriophyoids in various places in the acariform tree of life. Here we test the evolutionary relationships of eriophyoids using six genes and a representative taxonomic sampling of acariform mites. The total evidence analysis places eriophyoids as the sister group of the deep soil-dwelling, vermiform family Nematalycidae (Endeostigmata). This arrangement was supported by the rDNA and CO1 partitions. In contrast, the nuclear protein partition (genes EF1-α, SRP54, HSP70) suggests that Eriophyoidea is sister to a lineage including Tydeidae, Ereynetidae, and Eupodidae (Eupodina: Trombidiformes). On both of these alternative topologies, eriophyoids ap...
Background Acariformes is the most species-rich and morphologically diverse radiation of chelicer... more Background Acariformes is the most species-rich and morphologically diverse radiation of chelicerate arthropods, known from the oldest terrestrial ecosystems. It is also a key lineage in understanding the evolution of this group, with the most vexing question whether mites, or Acari (Parasitiformes and Acariformes) is monophyletic. Previous molecular studies recovered Acari either as monophyletic or non-monophyletic, albeit with a limited taxon sampling. Similarly, relationships between basal acariform groups (include little-known, deep-soil 'endeostigmatan' mites) and major lineages of Acariformes (Sarcoptiformes, Prostigmata) are virtually unknown. We infer phylogeny of chelicerate arthropods, using a large and representative dataset, comprising all main in- and outgroups (228 taxa). Basal diversity of Acariformes is particularly well sampled. With this dataset, we conduct a series of phylogenetically explicit tests of chelicerate and acariform relationships and present a ...
The variation in house dust mite microbial communities is important because various microorganism... more The variation in house dust mite microbial communities is important because various microorganisms modulate the production of allergens by their mite hosts and/or contaminate immunotherapeutic extracts. Temporal changes in mite microbiomes and the mite culture environment occurring at different stages of mite culture development are particularly understudied in this system. Here, we analyzed the dynamics of microbial communities during the culture growth of Dermatophagoides farinae. Changes in microbiomes were related to three key variables: the mite population density, microbial microcosm respiration, and concentration of guanine (the mite nitrogenous waste metabolite). Mite populations exhibited the following phases: exponential growth, plateau, and exponential decline. The intracellular bacterium Cardinium and the yeast Saccharomyces cerevisiae prevailed in the internal mite microbiomes, and the bacterium Lactobacillus fermentum was prevalent in the mite diet. The reduction in th...
We describe two new species and report new occurrences for six species of eriophyid mites (Erioph... more We describe two new species and report new occurrences for six species of eriophyid mites (Eriophyoidea: Eriophyidae) in Crimea: Abacarus denticulifer n. sp. from Agropyron cristatum (L.) Gaertn. (Poaceae), Aceria aculiformis Sukhareva 1986 from Melica ciliata L. (Poaceae), Aceria peucedani (Canestrini 1891) from Seseli tortuosum L. (Apiaceae), Anthocoptes recki (Bagdasarian 1972) n. comb. (from Tegonotus) from Pistacia atlantica subsp. mutica (Fisch. & C.A. Mey.) (Anacardiaceae), Epitrimerus inulae Farkas 1963 from Inula germanica L. (Asteraceae), Phyllocoptes sanctus n. sp. from Potentilla recta subsp. obscura (Willd.) (Rosaceae), Phyllocoptes bilobospinosus Chetverikov 2019 (in Chetverikov et al. 2019) from Tamarix spp. (Tamaricaceae), Tegoprionus dentatus (Nalepa 1891) from Galium verum L. (Rubiaceae). For an Indian phyllocoptine mite species associated with Apluda mutica L. (Poaceae), a new combination was proposed: Abacarus muticus (Sur…
A new vagrant eriophyoid mite species, Setoptus tsugivagus n. sp. Chetverikov (Eriophyoidea, Phyt... more A new vagrant eriophyoid mite species, Setoptus tsugivagus n. sp. Chetverikov (Eriophyoidea, Phytoptidae, Nalepellinae, Nalepellini), is described from the needles of the western hemlock, Tsuga heterophylla (Rafinesque) Sargent (Pinaceae) in Vancouver, Canada. The new species can be distinguished from all other members of Setoptus by a distinct pattern of several short longitudinal ridges on the posterior half of the prodorsal shield. Elements of the anal secretory apparatus (ASA) were observed in adults of S. tsugivagus n. sp., suggesting that the ASA is present in both major phylogenetic lineages of Eriophyoidea (Eriophyidae s. l. and Phytoptidae s. l.). Therefore, this structure could be a synapomorphy for all Eriophyoidea. We briefly discuss the function and morphological variety of the ASA in Eriophyoidea. D2 28S rDNA sequences of four nalepelline species were obtained: Boczekella reticulata Bagnyuk 1987 (GenBank accession number MK124605), Nalepella tsugifoliae Keifer 1953 (MK...
Mites of the genus Tyrophagus (Acari: Acaridae) are among the most widespread and common mites, i... more Mites of the genus Tyrophagus (Acari: Acaridae) are among the most widespread and common mites, inhabiting diverse natural and anthropogenic habitats. Some species are pests of agricultural products and stored food and/or live in house dust, causing allergies to humans. We sequenced 1.2 kb of the mitochondrial COI gene for 38 individuals belonging to seven species of Tyrophagus, including T. curvipenis, T. putrescentiae, T. fanetzhangorum, T. longior, T. perniciosus, and T. cf. similis. Molecular phylogenetic analyses (1) recovered two major clades corresponding to the presence or absence of eyespots, and (2) separated all included morphological species. Tyrophagus curvipenis and T. putrescentiae had the lowest between-species genetic distances (range, mean ± SD): 14.20-16.30, 15.17 ± 0.40 (K2P). The highest within-species variation was found in T. putrescentiae 0.00-4.33, 1.78 ± 1.44 (K2P). In this species, we recovered two distinct groups; however, no geographical or ecological di...
Evolution; international journal of organic evolution, Oct 22, 2017
Inferring cophylogeographic events requires matching the timing of these events on both host and ... more Inferring cophylogeographic events requires matching the timing of these events on both host and symbiont (e.g., parasites) phylogenies because divergences of hosts and their symbionts may not temporally coincide, and host switches may occur. We investigate a large radiation of birds (Passeriformes) and their permanent symbionts, the proctophyllodid feather mites (117 species from 116 bird species; six genes, 11,468 nt aligned) using two time-calibration strategies for mites: fossils only and host phylogeography only. Out of 10 putative cophylogeographic events 4 agree in timing for both symbiont and host events being synchronous co-origins or codispersals; three were based on host shifts, but agree in timing being very close to the origin of modern hosts; two disagree; and one large basal mite split was seemingly independent from host phylogeography. Among these events was an ancient (21-25.3 Mya), synchronous codispersal from the Old World leading to the origin and diversification...
We describe Tuccioglyphus setosus gen. et sp. nov. from the litter of commercially reared laying ... more We describe Tuccioglyphus setosus gen. et sp. nov. from the litter of commercially reared laying hens as well as wild birds in Brazil. The new genus Tuccioglyphus presents a mixture of character states between the two conventional subfamilies, Pyroglyphinae and Dermatophagoidinae. Based on this new unusual genus, we discuss character states delimiting these and other major subfamilies of the house dust mite family, Pyroglyphidae, as well as its most important and species-rich genus Dermatophagoides. An additional new genus, Marioglyphus gen. n., is proposed for Hughesiella valerioi Vargas and Smiley. Both Tuccioglyphus and Marioglyphus are related to the genus Hughesiella. A key to pyroglyphid genera of the World is presented.
Tyrophagus putrescentiae colonizes different human-related habitats and feeds on various post-har... more Tyrophagus putrescentiae colonizes different human-related habitats and feeds on various post-harvest foods. The microbiota acquired by these mites can influence the nutritional plasticity in different populations. We compared the bacterial communities of five populations of T. putrescentiae and one mixed population of T. putrescentiae and T. fanetzhangorum collected from different habitats. The bacterial communities of the six mite populations from different habitats and diets were compared by Sanger sequencing of cloned 16S rRNA obtained from amplification with universal eubacterial primers and using bacterial taxon-specific primers on the samples of adults/juveniles or eggs. Microscopic techniques were used to localize bacteria in food boli and mite bodies. The morphological determination of the mite populations was confirmed by analyses of CO1 and ITS fragment genes. The following symbiotic bacteria were found in compared mite populations: Wolbachia (two populations), Cardinium ...
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