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Commits on May 24, 2024

• fix bug in vcf causing issue with scatter gather bps format

  walaj

  authored
  ab39e3f
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Commits on May 18, 2024

• header issue for scatter/gather fixed

  

  Wala

  committed
  63ffa29
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• point to fixed SeqLib

  

  Wala

  committed
  76adeed
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Commits on May 6, 2024

• added back missing sample id header in tovcf module

  walaj

  committed
  fcfa17e
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Commits on May 5, 2024

• pointing to updated SeqLib with segfault fix

  walaj

  committed
  b60423e
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Commits on Mar 25, 2024

• added heavier debugging

  walaj

  committed
  859b9a5
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• compiler bug

  walaj

  committed
  20b6da2
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Commits on Mar 22, 2024

• added tovcf module

  walaj

  committed
  d9f37db
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Commits on Mar 6, 2024

• updated build for mac

  walaj

  committed
  ebf639e
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• updating SeqLib for mac build

  walaj

  committed
  eb32ca8
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Commits on Oct 13, 2023

• updated readme

  

  Wala

  committed
  5d6b311
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• removed config.h dependency

  

  Wala

  committed
  a59f894
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Commits on Sep 13, 2023

• removed autotools

  

  Wala

  committed
  4f31ba1
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Commits on Sep 12, 2023

• Revert "deprecated refilter and updated verison number"

  

  Wala

  committed
  876f710
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• updated SeqLib with sort capabilities

  

  jwala

  committed
  9193015
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• added alignment sort on contigs, removed qname reject for short insert sizes

  

  jwala

  committed
  1fe3d1f
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Commits on May 15, 2023

• Merge pull request #121 from seedgeorge/patch-1

  walaj

  authored
  c8e87dd
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• deprecated refilter and updated verison number

  

  jwala

  committed
  cee0b61
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• minor fix for issue #112

  

  jwala

  committed
  6630e9f
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Commits on Apr 13, 2023

• Update Dockerfile

  seedgeorge

  authored
  d14b114
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Commits on Jun 25, 2022

• Merge pull request #114 from Rapsssito/patch-1

  walaj

  authored
  e384f5c
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Commits on Jun 23, 2022

• feat: Add Dockerfile

  Rapsssito

  authored
  dbc4ad4
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Commits on Nov 11, 2020

• issue 92 patch

  

  Jeremiah Wala

  committed
  0f60e36
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Commits on Mar 7, 2020

• fix for issue #73

  

  Jeremiah Wala

  committed
  4d7b571
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Commits on Feb 18, 2020

• fixed issue #78 for very long chromosomes

  

  Jeremiah Wala

  committed
  e2c11a9
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Commits on Sep 12, 2019

• fixed parsing bug when no fusions in svaba-annotate

  

  Jeremiah Wala

  committed
  c0fecb6
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Commits on Aug 21, 2019

• fixed sense/anti-sense bug in svaba-annotate

  

  Jeremiah Wala

  committed
  743ed6f
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Commits on Apr 25, 2019

• minor refactoring in plotting, svaba annotate

  walaj

  committed
  a77a3ab
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Commits on Apr 8, 2019

• expanded contig output for all-contigs (#63)

  

  Jeremiah Wala

  committed
  8e53e3c
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Commits on Mar 30, 2019

• svaba-annotate to read gz (#60)

  

  Jeremiah Wala

  committed
  6696d70
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Commits on Mar 21, 2019

• fixed VCF extra field issue #58

  walaj

  committed
  ab131ce
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Commits on Mar 13, 2019

• removed Y and B help section from refilter

  walaj

  committed
  893ded1
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• updated annotation scriopt

  walaj

  committed
  b9b4fcd
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Commits on Mar 4, 2019

• Merge pull request #53 from walaj/parallel

  walaj

  authored
  d12cf22
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• fixed disc mapq issue. added hashed id

  walaj

  committed
  d8d06f1
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