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FROM nvidia/cuda:11.3.1-cudnn8-runtime-ubuntu20.04
# FROM pytorch/pytorch:1.12.1-cuda11.3-cudnn8-devel
RUN echo $CUDA_HOME
# ENV LD_LIBRARY_PATH /usr/local/cuda/lib64/stubs/:$LD_LIBRARY_PATH
# ENV CUDA_HOME /usr/local/cuda
# ENV LD_LIBRARY_PATH /usr/local/cuda/lib64/:$LD_LIBRARY_PATH
# ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
# ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64
# ENV PATH=/opt/conda/bin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
# ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64
#
ENV DEBIAN_FRONTEND=noninteractive
ARG UID=1000
ARG GID=1000
ARG USER=developer
ARG GROUP=$USER
ENV FORCE_CUDA=1
RUN echo $(nvcc --version)
# Install necessary packages
RUN --mount=type=cache,target=/var/cache/apt apt update && apt install -y --no-install-recommends \
sudo \
git \
wget \
bzip2 \
ca-certificates \
libx11-6 \
python3-opencv \
vim \
&& rm -rf /var/lib/apt/lists/*
## Create a non-root user and group
RUN addgroup --gid $GID $GROUP
RUN adduser --disabled-password --gecos '' --uid $UID --gid $GID $USER && \
adduser $USER sudo && \
echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers
# RUN useradd -D -mU ${USER} --uid=${UID}
# Run as this user from now on
USER $USER:$GID
# Install Miniconda
WORKDIR /home/$USER
RUN wget -q https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O ~/miniconda.sh \
&& /bin/bash ~/miniconda.sh -b -p ~/miniconda \
&& rm ~/miniconda.sh
ENV PATH=/home/$USER/miniconda/bin:$PATH
# Set up conda environment
COPY dermsynth3d.yml .
RUN conda env create -f dermsynth3d.yml && conda clean -afy
ENV CONDA_DEFAULT_ENV=dermsynth3d
ENV CONDA_PREFIX=/home/$USER/miniconda/envs/$CONDA_DEFAULT_ENV
ENV PATH=$CONDA_PREFIX/bin:$PATH
RUN echo "source activate $(head -1 dermsynth3d.yml | cut -d' ' -f2)" > ~/.bashrc
ENV PATH /home/$USER/miniconda/envs/$(head -1 dermsynth3d.yml | cut -d' ' -f2)/bin:$PATH
# Copy code
COPY data /demo_data
# COPY . /home/$USER/DermSynth3D
# Test imports
# RUN git clone --recurse-submodules https://github.com/sfu-mial/DermSynth3D.git
#, "python", "scripts/gen_data.py"]
WORKDIR /home/$USER/DermSynth3D