8000 Merge remote-tracking branch 'upstream/master' into Proposition-for-B… · scikit-learn/scikit-learn@a7337d2 · GitHub
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Shao Yang Hong
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Merge remote-tracking branch 'upstream/master' into Proposition-for-BernoulliNB-and-MultinomialNB-when-alpha-is-close-or-equal-0
# Conflicts: # doc/whats_new/v0.24.rst # sklearn/naive_bayes.py
2 parents 5782e6f + f77fb72 commit a7337d2

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‎.circleci/config.yml

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environment:
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- OMP_NUM_THREADS: 2
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- MKL_NUM_THREADS: 2
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- MINICONDA_PATH: ~/miniconda
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- CONDA_ENV_NAME: testenv
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- PYTHON_VERSION: 3.6
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- NUMPY_VERSION: 1.13.3
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- SCIPY_VERSION: 0.19.1
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- MATPLOTLIB_VERSION: 2.1.1
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# on conda, this is the latest for python 3.5
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# The following places need to be in sync with regard to Cython version:
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# - .circleci config file
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# - sklearn/_build_utils/__init__.py
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# - advanced installation guide
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- CYTHON_VERSION: 0.28.5
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- SCIKIT_IMAGE_VERSION: 0.13
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- NUMPY_VERSION: 'min'
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- SCIPY_VERSION: 'min'
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- MATPLOTLIB_VERSION: 'min'
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- CYTHON_VERSION: 'min'
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- SCIKIT_IMAGE_VERSION: 'min'
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- SPHINX_VERSION: 'min'
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- PANDAS_VERSION: 'min'
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steps:
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- checkout
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- run: ./build_tools/circle/checkout_merge_commit.sh
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environment:
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- OMP_NUM_THREADS: 2
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- MKL_NUM_THREADS: 2
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- MINICONDA_PATH: ~/miniconda
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- CONDA_ENV_NAME: testenv
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- PYTHON_VERSION: 3
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- NUMPY_VERSION: 'latest'
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- SCIPY_VERSION: 'latest'
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- MATPLOTLIB_VERSION: 'latest'
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- CYTHON_VERSION: 'latest'
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- SCIKIT_IMAGE_VERSION: 'latest'
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- SPHINX_VERSION: 'min'
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- PANDAS_VERSION: 'latest'
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steps:
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- checkout
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- run: ./build_tools/circle/checkout_merge_commit.sh

‎.codecov.yml

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target: auto
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threshold: 1%
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codecov:
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notify:
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# Prevent coverage status to upload multiple times for parallel and long
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# running CI pipelines. This configuration is particularly useful on PRs
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# to avoid confusion. Note that this value is set to the number of Azure
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# Pipeline jobs uploading coverage reports.
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after_n_builds: 6
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ignore:
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- "sklearn/externals"
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- "sklearn/_build_utils"

‎.github/FUNDING.yml

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# These are supported funding model platforms
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github: # Replace with up to 4 GitHub Sponsors-enabled usernames e.g., [user1, user2]
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patreon: # Replace with a single Patreon username
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open_collective: # Replace with a single Open Collective username
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ko_fi: # Replace with a single Ko-fi username
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tidelift: # Replace with a single Tidelift platform-name/package-name e.g., npm/babel
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community_bridge: # Replace with a single Community Bridge project-name e.g., cloud-foundry
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liberapay: # Replace with a single Liberapay username
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issuehunt: # Replace with a single IssueHunt username
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otechie: # Replace with a single Otechie username
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custom: ['https://numfocus.org/donate-to-scikit-learn']

‎.github/ISSUE_TEMPLATE/config.yml

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blank_issues_enabled: false
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contact_links:
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- name: Stack overflow
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url: https://stackoverflow.com/questions/tagged/scikit-learn
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about: Please ask and answer usage questions on stackoverflow
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- name: Mailing list
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url: https://mail.python.org/mailman/listinfo/scikit-learn
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about: General discussions and announcements on the mailing list
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- name: Gitter
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url: https://gitter.im/scikit-learn/scikit-learn
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about: Users and developers can sometimes be found on the gitter channel

‎.github/ISSUE_TEMPLATE/blank_template.md renamed to ‎.github/ISSUE_TEMPLATE/other_template.md

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‎.github/ISSUE_TEMPLATE/usage_question.md

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‎.github/labeler-module.yml

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module:cluster:
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- sklearn/cluster/**/*
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module:common:
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- sklearn/common/**/*
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module:compose:
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- sklearn/compose/**/*
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module:covariance:
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- sklearn/covariance/**/*
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module:cross_decomposition:
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- sklearn/cross_decomposition/**/*
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module:datasets:
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- sklearn/datasets/**/*
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module:decomposition:
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- sklearn/decomposition/**/*
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module:ensemble:
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- sklearn/ensemble/**/*
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module:feature_extraction:
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- sklearn/feature_extraction/**/*
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module:feature_selection:
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- sklearn/feature_selection/**/*
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module:gaussian_process:
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- sklearn/gaussian_process/**/*
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module:impute:
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- sklearn/impute/**/*
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module:inspection:
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- sklearn/inspection/**/*
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module:linear_model:
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- sklearn/linear_model/**/*
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module:manifold:
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- sklearn/manifold/**/*
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module:metrics:
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- sklearn/metrics/**/*
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module:mixture:
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- sklearn/mixture/**/*
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module:model_selection:
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- sklearn/model_selection/**/*
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module:naive_bayes:
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- sklearn/naive_bayes.py
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module:neighbors:
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- sklearn/neighbors/**/*
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module:neural_network:
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- sklearn/neural_network/**/*
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module:pipeline:
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- sklearn/pipeline.py
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module:preprocessing:
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- sklearn/preprocessing/**/*
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module:semi_supervised:
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- sklearn/semi_supervised/**/*
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module:svm:
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- sklearn/svm/**/*
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module:tree:
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- sklearn/tree/**/*
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module:utils:
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- sklearn/utils/**/*

‎.github/labeler.yml

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module:cluster:
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- sklearn/cluster/**/*
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module:common:
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- sklearn/common/**/*
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module:compose:
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- sklearn/compose/**/*
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module:covariance:
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- sklearn/covariance/**/*
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module:cross_decomposition:
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- sklearn/cross_decomposition/**/*
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module:datasets:
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- sklearn/datasets/**/*
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module:decomposition:
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- sklearn/decomposition/**/*
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module:ensemble:
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- sklearn/ensemble/**/*
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module:feature_extraction:
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- sklearn/feature_extraction/**/*
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module:feature_selection:
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- sklearn/feature_selection/**/*
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module:gaussian_process:
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- sklearn/gaussian_process/**/*
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module:impute:
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- sklearn/impute/**/*
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module:inspection:
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- sklearn/inspection/**/*
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module:linear_model:
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- sklearn/linear_model/**/*
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module:manifold:
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- sklearn/manifold/**/*
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module:metrics:
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- sklearn/metrics/**/*
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module:mixture:
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- sklearn/mixture/**/*
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module:model_selection:
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- sklearn/model_selection/**/*
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module:naive_bayes:
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- sklearn/naive_bayes.py
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module:neighbors:
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- sklearn/neighbors/**/*
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module:neural_network:
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- sklearn/neural_network/**/*
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module:pipeline:
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- sklearn/pipeline.py
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module:preprocessing:
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- sklearn/preprocessing/**/*
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module:semi_supervised:
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- sklearn/semi_supervised/**/*
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module:svm:
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- sklearn/svm/**/*
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module:tree:
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- sklearn/tree/**/*
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module:utils:
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- sklearn/utils/**/*
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labels:
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'Documentation':
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- '\bDOC\b'
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'Build / CI':
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- '\bCI\b'

‎.github/workflows/assign.yml

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jobs:
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one:
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runs-on: ubuntu-latest
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if: >-
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(github.event.comment.body == 'take' ||
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github.event.comment.body == 'Take')
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&& !github.event.issue.assignee
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steps:
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- if: github.event.comment.body == 'take'
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name:
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run: |
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echo "Assigning issue ${{ github.event.issue.number }} to ${{ github.event.comment.user.login }}"
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curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -d '{"assignees": ["${{ github.event.comment.user.login }}"]}' https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/assignees
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curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -X "DELETE" https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/labels/help%20wanted
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- run: |
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echo "Assigning issue ${{ github.event.issue.number }} to ${{ github.event.comment.user.login }}"
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curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -d '{"assignees": ["${{ github.event.comment.user.login }}"]}' https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/assignees
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curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -X "DELETE" https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/labels/help%20wanted

‎.github/workflows/check-manifest.yml

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name: "Check Manifest"
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on:
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schedule:
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- cron: '0 0 * * *'
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jobs:
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check:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v2
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- uses: actions/setup-python@v2
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with:
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python-version: '3.8'
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- name: Install dependencies
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# scipy and cython are required to build sdist
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run: |
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python -m pip install --upgrade pip
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pip install check-manifest scipy cython
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- run: |
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check-manifest -v

‎.github/workflows/labeler.yml renamed to ‎.github/workflows/labeler-module.yml

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name: "Pull Request Labeler"
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on:
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schedule:
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- cron: "*/10 * * * *"
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on: pull_request_target
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runs-on: ubuntu-latest
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- uses: thomasjpfan/labeler@v2.4.6
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- uses: thomasjpfan/labeler@v2.5.0
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continue-on-error: true
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if: github.repository == 'scikit-learn/scikit-learn'
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repo-token: "${{ secrets.GITHUB_TOKEN }}"
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max-labels: "3"
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configuration-path: ".github/labeler-module.yml"

‎.github/workflows/labeler-title-regex.yml

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name: Pull Request Regex Title Labeler
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on:
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pull_request_target:
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types: [opened]
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jobs:
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labeler:
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runs-on: ubuntu-latest
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steps:
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- name: Check Labels
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id: labeler
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continue-on-error: true
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uses: jimschubert/labeler-action@v2
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with:
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GITHUB_TOKEN: ${{secrets.GITHUB_TOKEN}}

‎.github/workflows/sync_pull_request.yml

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name: Sync Pull Request
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on:
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pull_request_target:
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types: [labeled]
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jobs:
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sync_pull_request:
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runs-on: ubuntu-latest
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if: contains(github.event.pull_request.labels.*.name, 'ci sync')
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steps:
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- name: Remove label
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# The label is always removed so that this action can be triggered
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# again by adding the label even if the sync fails.
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curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -X "DELETE" https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.pull_request.number }}/labels/ci%20sync
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- uses: actions/checkout@v2
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with:
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fetch-depth: '0'
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- name: Sync with master
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run: |
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set -xe
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git remote add pr_remote ${{ github.event.pull_request.head.repo.html_url }}
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git fetch pr_remote ${{ github.event.pull_request.head.ref }}
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git checkout -b pr_branch pr_remote/${{ github.event.pull_request.head.ref }}
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git config user.name github-actions
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git config user.email github-actions@github.com
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git merge origin/master
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git push pr_remote HEAD:${{ github.event.pull_request.head.ref }}

‎.github/workflows/unassign.yml

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name: Unassign
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#Runs when a contributor has unassigned themselves from the issue and adds 'help wanted' and 'stalled' tags
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#Runs when a contributor has unassigned themselves from the issue and adds 'help wanted'
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types: unassigned
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if: github.event.issue.state == 'open'
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echo "Marking issue ${{ github.event.issue.number }} as stalled"
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curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -d '{"labels": ["help wanted","Stalled"]}' https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/labels
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echo "Marking issue ${{ github.event.issue.number }} as help wanted"
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curl -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" -d '{"labels": ["help wanted"]}' https://api.github.com/repos/${{ github.repository }}/issues/${{ github.event.issue.number }}/labels

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