Description
Trying to build on Jetson Nano, encountering a build error with 0.17.1
Installation using pip3 install scikit-image==0.17.1
Collecting scikit-image==0.17.1
Downloading scikit-image-0.17.1.tar.gz (29.8 MB)
ERROR: Command errored out with exit status 1:
command: /usr/bin/python3 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-lj9nm9y7/scikit-image/setup.py'"'"'; __file__='"'"'/tmp/pip-install-lj9nm9y7/scikit-image/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /tmp/pip-pip-egg-info-0kn8yhc5
cwd: /tmp/pip-install-lj9nm9y7/scikit-image/
Complete output (7 lines):
Traceback (most recent call last):
File "", line 1, in
File "/tmp/pip-install-lj9nm9y7/scikit-image/setup.py", line 30, in
LONG_DESCRIPTION = f.read()
File "/usr/lib/python3.6/encodings/ascii.py", line 26, in decode
return codecs.ascii_decode(input, self.errors)[0]
UnicodeDecodeError: 'ascii' codec can't decode byte 0xc3 in position 4029: ordinal not in range(128)
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
Way to reproduce
Generated a small Dockerfile for this purpose to demonstrate the error (because of the base container being nano specific, might need one to run it):
FROM nvcr.io/nvidia/l4t-base:r32.3.1
ENV DEBIAN_FRONTEND noninteractive
RUN apt-get update -y \
&& apt-get install -y --no-install-recommends apt-utils \
&& apt-get install -y \
build-essential python3-dev libpython3-dev python-pil python3-tk python-imaging-tk
RUN wget -q -O /tmp/get-pip.py --no-check-certificate https://bootstrap.pypa.io/get-pip.py \
&& python3 /tmp/get-pip.py \
&& pip3 install -U pip
RUN pip3 install -U testresources setuptools
RUN apt install -y
RUN pip3 install -U numpy
RUN pip3 install scikit-image==0.17.1
Version information
Using the temporary container built right before the build log (next section)
docker run --rm -it de732dc209a4
root@a8b1e7122edb:/# python3
Python 3.6.9 (default, Apr 18 2020, 01:56:04)
[GCC 8.4.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> from __future__ import print_function
>>> import sys; print(sys.version)
3.6.9 (default, Apr 18 2020, 01:56:04)
[GCC 8.4.0]
>>> import platform; print(platform.platform())
Linux-4.9.140-tegra-aarch64-with-Ubuntu-18.04-bionic
>>> import skimage; print("scikit-image version: {}".format(skimage.__version__))
Traceback (most recent call last):
File "", line 1, in
ModuleNotFoundError: No module named 'skimage'
>>> import numpy; print("numpy version: {}".format(numpy.__version__))
Build log
docker build --tag ski171:builderror -f scikit-image-0.17.1-Dockerfile .
Sending build context to Docker daemon 2.56kB
Step 1/8 : FROM nvcr.io/nvidia/l4t-base:r32.3.1
---> aaaa63e7b12d
Step 2/8 : ENV DEBIAN_FRONTEND noninteractive
---> Using cache
---> b35780f1b3af
Step 3/8 : RUN apt-get update -y && apt-get install -y --no-install-recommends apt-utils && apt-get install -y python3-dev libpython3-dev python-pil python3-tk python-imaging-tk
---> Using cache
---> a96cbdbb8f3e
Step 4/8 : RUN wget -q -O /tmp/get-pip.py --no-check-certificate https://bootstrap.pypa.io/get-pip.py && python3 /tmp/get-pip.py && pip3 install -U pip
---> Using cache
---> b6852764a3b4
Step 5/8 : RUN pip3 install -U testresources setuptools
---> Using cache
---> d895bea13fb3
Step 6/8 : RUN apt install -y build-essential
---> Using cache
---> 4c25ca5a497d
Step 7/8 : RUN pip3 install -U numpy
---> Using cache
---> de732dc209a4
Step 8/8 : RUN pip3 install scikit-image==0.17.1
---> Running in 5b135c7e3b0d
Collecting scikit-image==0.17.1
Downloading scikit-image-0.17.1.tar.gz (29.8 MB)
ERROR: Command errored out with exit status 1:
command: /usr/bin/python3 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-lj9nm9y7/scikit-image/setup.py'"'"'; __file__='"'"'/tmp/pip-install-lj9nm9y7/scikit-image/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /tmp/pip-pip-egg-info-0kn8yhc5
cwd: /tmp/pip-install-lj9nm9y7/scikit-image/
Complete output (7 lines):
Traceback (most recent call last):
File "", line 1, in
File "/tmp/pip-install-lj9nm9y7/scikit-image/setup.py", line 30, in
LONG_DESCRIPTION = f.read()
File "/usr/lib/python3.6/encodings/ascii.py", line 26, in decode
return codecs.ascii_decode(input, self.errors)[0]
UnicodeDecodeError: 'ascii' codec can't decode byte 0xc3 in position 4029: ordinal not in range(128)
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
The command '/bin/sh -c pip3 install scikit-image==0.17.1' returned a non-zero code: 1
I will try to see if another arm64 base image can be used to reproduce the error.