Makefile.nt

#Deployment Makefile
MAXLIST = 45

URL=ftp://ftp.ncbi.nlm.nih.gov/blast/db
URL2=http://mirrors.vbi.vt.edu/mirrors/ftp.ncbi.nih.gov/blast/db
URL3=ftp://bio-mirror.net/biomirror//blast/db
DBNAME=nt
DBVERSION=$(shell date +'%Y-%m-%d')
DEST ?= /blast
targets = $(addprefix $(DBNAME)., $(shell seq -w 0 $(MAXLIST)))

install: $(targets) get_aria2
	@echo "Install the database $(DBNAME)"

$(targets):
	@echo "Download $@.tar.gz"
	@-mkdir -p $(DEST)
	-aria2c -s 5 -t 90 --retry-wait=10 -m 10 -c -q -d $(DEST)/ $(URL)/$@.tar.gz $(URL2)/$@.tar.gz $(URL3)/$@.tar.gz
	@-tar xfz $(DEST)/$@.tar.gz -C $(DEST)
	@-rm -f $(DEST)/$@.tar.gz

get_aria2:
	@apt-get update
	@apt-get install -y aria2

update: remove install

remove:
	@echo "Removing database $(DBNAME)"
	@rm -f $(DEST)/$(DBNAME)*