8000 BUG: recently added f2py test (`test_gh25784`) is failing in macOS wheel builds · Issue #26810 · numpy/numpy · GitHub
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BUG: recently added f2py test (test_gh25784) is failing in macOS wheel builds #26810

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rgommers opened this issue Jun 28, 2024 · 0 comments · Fixed by #26812
Closed

BUG: recently added f2py test (test_gh25784) is failing in macOS wheel builds #26810

rgommers opened this issue Jun 28, 2024 · 0 comments · Fixed by #26812
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00 - Bug component: numpy.f2py

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@rgommers
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Example CI log: link. It's failing consistently on all macOS wheel build jobs, which is preventing nightly wheels from being uploaded.

I haven't looked in more detail at what the problem is. If we can't fix it right now, we should disable the test.

  _________________________________ test_gh25784 _________________________________
  [gw3] darwin -- Python 3.12.4 /private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/bin/python
  
      @pytest.mark.slow
      @pytest.mark.skipif(platform.system() not in ['Linux', 'Darwin'], reason='Unsupported on this platform for now')
      def test_gh25784():
          # Compile dubious file using passed flags
          try:
  >           aa = util.build_module(
                  [util.getpath("tests", "src", "regression", "f77fixedform.f95")],
                  options=[
                      # Meson will collect and dedup these to pass to fortran_args:
                      "--f77flags='-ffixed-form -O2'",
                      "--f90flags=\"-ffixed-form -Og\"",
                  ],
                  module_name="Blah",
              )
  
  
  ../venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/tests/test_regression.py:131: 
  _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
  ../venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/tests/util.py:84: in wrapper
      memo[key] = func(*a, **kw)
          a          = ([PosixPath('/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77fixedform.f95')],)
          func       = <function build_module at 0x117847600>
          key        = '(([PosixPath(\'/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-te...],), {\'options\': ["--f77flags=\'-ffixed-form -O2\'", \'--f90flags="-ffixed-form -Og"\'], \'module_name\': \'Blah\'})'
          kw         = {'module_name': 'Blah', 'options': ["--f77flags='-ffixed-form -O2'", '--f90flags="-ffixed-form -Og"']}
          memo       = {'(([PosixPath(\'/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-t...ub"...\n          output1,output2 = testsub(input1,input2)\n    Wrote C/API module "Blah" to file "./Blahmodule.c"\n')}
  _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
  
  source_files = [PosixPath('/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77fixedform.f95')]
  options = ["--f77flags='-ffixed-form -O2'", '--f90flags="-ffixed-form -Og"']
  skip = [], only = [], module_name = 'Blah'
  
      @_memoize
      def build_module(source_files, options=[], skip=[], only=[], module_name=None):
          """
          Compile and import a f2py module, built from the given files.
      
          """
      
          code = f"import sys; sys.path = {sys.path!r}; import numpy.f2py; numpy.f2py.main()"
      
          d = get_module_dir()
      
          # Copy files
          dst_sources = []
          f2py_sources = []
          for fn in source_files:
              if not os.path.isfile(fn):
                  raise RuntimeError("%s is not a file" % fn)
              dst = os.path.join(d, os.path.basename(fn))
              shutil.copyfile(fn, dst)
              dst_sources.append(dst)
      
              base, ext = os.path.splitext(dst)
              if ext in (".f90", ".f95", ".f", ".c", ".pyf"):
                  f2py_sources.append(dst)
      
          assert f2py_sources
      
          # Prepare options
          if module_name is None:
              module_name = get_temp_module_name()
          f2py_opts = ["-c", "-m", module_name] + options + f2py_sources
          f2py_opts += ["--backend", "meson"]
          if skip:
              f2py_opts += ["skip:"] + skip
          if only:
              f2py_opts += ["only:"] + only
      
          # Build
          cwd = os.getcwd()
          try:
              os.chdir(d)
              cmd = [sys.executable, "-c", code] + f2py_opts
              p = subprocess.Popen(cmd,
                                   stdout=subprocess.PIPE,
                                   stderr=subprocess.STDOUT)
              out, err = p.communicate()
              if p.returncode != 0:
  >               raise RuntimeError("Running f2py failed: %s\n%s" %
                                     (cmd[4:], asunicode(out)))
  E                                  RuntimeError: Running f2py failed: ['-m', 'Blah', "--f77flags='-ffixed-form -O2'", '--f90flags="-ffixed-form -Og"', '/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95', '--backend', 'meson']
  E                                  The Meson build system
  E                                  Version: 1.4.1
  E                                  Source dir: /private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpn58zcbj3
  E                                  Build dir: /private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpn58zcbj3/bbdir
  E                                  Build type: native build
  E                                  Project name: Blah
  E                                  Project version: 0.1
  E                                  
  E                                  meson.build:1:0: ERROR: Unknown compiler(s): [['gfortran'], ['flang'], ['nvfortran'], ['pgfortran'], ['ifort'], ['ifx'], ['g95']]
  E                                  The following exception(s) were encountered:
  E                                  Running `gfortran --version` gave "[Errno 2] No such file or directory: 'gfortran'"
  E                                  Running `gfortran -V` gave "[Errno 2] No such file or directory: 'gfortran'"
  E                                  Running `flang --version` gave "[Errno 2] No such file or directory: 'flang'"
  E                                  Running `flang -V` gave "[Errno 2] No such file or directory: 'flang'"
  E                                  Running `nvfortran --version` gave "[Errno 2] No such file or directory: 'nvfortran'"
  E                                  Running `nvfortran -V` gave "[Errno 2] No such file or directory: 'nvfortran'"
  E                                  Running `pgfortran --version` gave "[Errno 2] No such file or directory: 'pgfortran'"
  E                                  Running `pgfortran -V` gave "[Errno 2] No such file or directory: 'pgfortran'"
  E                                  Running `ifort --version` gave "[Errno 2] No such file or directory: 'ifort'"
  E                                  Running `ifort -V` gave "[Errno 2] No such file or directory: 'ifort'"
  E                                  Running `ifx --version` gave "[Errno 2] No such file or d
8000
irectory: 'ifx'"
  E                                  Running `ifx -V` gave "[Errno 2] No such file or directory: 'ifx'"
  E                                  Running `g95 --version` gave "[Errno 2] No such file or directory: 'g95'"
  E                                  Running `g95 -V` gave "[Errno 2] No such file or directory: 'g95'"
  E                                  
  E                                  A full log can be found at /private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpn58zcbj3/bbdir/meson-logs/meson-log.txt
  E                                  Traceback (most recent call last):
  E                                    File "<string>", line 1, in <module>
  E                                    File "/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/f2py2e.py", line 769, in main
  E                                      run_compile()
  E                                    File "/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/f2py2e.py", line 741, in run_compile
  E                                      builder.compile()
  E                                    File "/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/_backends/_meson.py", line 193, in compile
  E                                      self.run_meson(self.build_dir)
  E                                    File "/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/_backends/_meson.py", line 186, in run_meson
  E                                      self._run_subprocess_command(setup_command, build_dir)
  E                                    File "/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/_backends/_meson.py", line 182, in _run_subprocess_command
  E                                      subprocess.run(command, cwd=cwd, check=True)
  E                                    File "/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/subprocess.py", line 571, in run
  E                                      raise CalledProcessError(retcode, process.args,
  E                                  subprocess.CalledProcessError: Command '['meson', 'setup', 'bbdir']' returned non-zero exit status 1.
  E                                  Using meson backend
  E                                  Will pass --lower to f2py
  E                                  See https://numpy.org/doc/stable/f2py/buildtools/meson.html
  E                                  Reading fortran codes...
  E                                  	Reading file '/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95' (format:free)
  E                                  Line #2 in /var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95:"      subroutine mwe( "
  E                                  	analyzeline: No name/args pattern found for line.
  E                                  Post-processing...
  E                                  	Block: Blah
  E                                  			Block: unknown_subroutine
  E                                  Applying post-processing hooks...
  E                                    character_backward_compatibility_hook
  E                                  Post-processing (stage 2)...
  E                                  Building modules...
  E                                      Building module "Blah"...
  E                                      Generating possibly empty wrappers"
  E                                      Maybe empty "Blah-f2pywrappers.f"
  E                                          Constructing wrapper function "unknown_subroutine"...
  E                                            unknown_subroutine()
  E                                      Wrote C/API module "Blah" to file "./Blahmodule.c"
  
  base       = '/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform'
  cmd        = ['/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/bin/...x86_64/venv-test-x86_64/lib/python3.12/site-packages']; import numpy.f2py; numpy.f2py.main()", '-c', '-m', 'Blah', ...]
  code       = "import sys; sys.path = ['/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh', '/private/var/folders/n0/93pm...run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages']; import numpy.f2py; numpy.f2py.main()"
  cwd        = '/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/test_cwd'
  d          = '/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh'
  dst        = '/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95'
  dst_sources = ['/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95']
  err        = None
  ext        = '.f95'
  f2py_opts  = ['-c', '-m', 'Blah', "--f77flags='-ffixed-form -O2'", '--f90flags="-ffixed-form -Og"', '/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95', ...]
  f2py_sources = ['/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95']
  fn         = '/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpbpgg9tdh/f77fixedform.f95'
  module_name = 'Blah'
  only       = []
  options    = ["--f77flags='-ffixed-form -O2'", '--f90flags="-ffixed-form -Og"']
  out        = b'The Meson build system\nVersion: 1.4.1\nSource dir: /private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/tmpn58z...tion "unknown_subroutine"...\n          unknown_subroutine()\n    Wrote C/API module "Blah" to file "./Blahmodule.c"\n'
  p          = <Popen: returncode: 1 args: ['/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxr...>
  skip       = []
  source_files = [PosixPath('/private/var/folders/n0/93pmqpw54kn_g2qbs9kqxrxh0000gn/T/cibw-run-z256dk15/cp312-macosx_x86_64/venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77fixedform.f95')]
  
  ../venv-test-x86_64/lib/python3.12/site-packages/numpy/f2py/tests/util.py:149: RuntimeError
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CI,TST: Fix meson tests needing gfortran [wheel build] HaoZeke/numpy
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