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Issues list

Rerformating with Ruff Code quality This issue tackles code quality (code refactoring, PEP8...). Effort: medium The issue is likely to require a decent amount of work (in between a few hours and a couple days). Good first issue Good for newcomers. Equivalent to "very low" effort. Impact: low Solving this issue will have a small impact on the project. Priority: low The task is not urgent and can be delayed.
#4579 opened Oct 2, 2024 by Remi-Gau
2 of 3 tasks
Set up a benchmark suite to assess performance and check for improvment or regression Performance issues related to computation time or memory usage
#4573 opened Sep 27, 2024 by Remi-Gau
[BUG] When using NiftiLabelsMasker with an empty confounds DataFrame, the masker raises an error
#4570 opened Sep 26, 2024 by mibur1
3 of 9 tasks
@mibur1
3
What should be the shape of data in SurfaceImage? Effort: medium The issue is likely to require a decent amount of work (in between a few hours and a couple days). Impact: high Solving this issue will have a high impact on the project. Priority: high The task is urgent and needs to be addressed as soon as possible. Surface Related to surface data or surface analysis.
#4569 opened Sep 26, 2024 by Remi-Gau 0.11.0
1
Move experimental Surface related API into stable codebase Effort: high The issue is likely to require a serious amount of work (more than a couple of days). Impact: high Solving this issue will have a high impact on the project. Priority: high The task is urgent and needs to be addressed as soon as possible. Surface Related to surface data or surface analysis.
#4568 opened Sep 26, 2024 by Remi-Gau
8 tasks
0.11.0
1
Adapt first_level_from_bids to run on surface images directly BIDS Effort: medium The issue is likely to require a decent amount of work (in between a few hours and a couple days). Impact: medium Solving this issue will have a decent impact on the project. Priority: medium The task is important but not urgent and should be addressed over the next few months. Surface Related to surface data or surface analysis.
#4567 opened Sep 26, 2024 by Remi-Gau
1
GLM report on surface Effort: high The issue is likely to require a serious amount of work (more than a couple of days). GLM Issues/PRs related to the nilearn.glm module. Impact: medium Solving this issue will have a decent impact on the project. Priority: medium The task is important but not urgent and should be addressed over the next few months. Report Surface Related to surface data or surface analysis.
#4566 opened Sep 26, 2024 by Remi-Gau
1
Implement saving SurfaceImage data to files Effort: medium The issue is likely to require a decent amount of work (in between a few hours and a couple days). Impact: high Solving this issue will have a high impact on the project. Priority: high The task is urgent and needs to be addressed as soon as possible. Surface Related to surface data or surface analysis.
#4565 opened Sep 26, 2024 by Remi-Gau 0.11.0
Better document how 0 duration events are handled Documentation for documentation related questions or requests GLM Issues/PRs related to the nilearn.glm module.
#4562 opened Sep 25, 2024 by Remi-Gau
1
Centralize some of "our" datasets on OSF Atlas Datasets This issue is related to datasets or the :mod:`nilearn.datasets` module. Infrastructure This issue describes a problem with the project's infrastructure (CI/CD...). Maintenance This issue is related to maintenance work. Priority: low The task is not urgent and can be delayed.
#4561 opened Sep 25, 2024 by Remi-Gau
Improve "internal" documentation of github actions Documentation for documentation related questions or requests
#4540 opened Sep 10, 2024 by Remi-Gau
Roadmap for version 1.0.0
#4539 opened Sep 10, 2024 by Remi-Gau
1 task
use scikit-learn check_estimator to ensure compatibiity of Nilearn estimators with scikit-learn Code quality This issue tackles code quality (code refactoring, PEP8...).
#4538 opened Sep 9, 2024 by Remi-Gau
8
[ENH] Cerebullum is missing when I use plotting.view_markers()
#4534 opened Sep 5, 2024 by DrYaoBrain
1 task done
20
[ENH] add possibility to compute design efficiency for a design matrix and a given contrast (or set of contrasts) Discussion This issue is used to hold a general discussion on a specific topic where community feedback is desi GLM Issues/PRs related to the nilearn.glm module.
#4526 opened Sep 4, 2024 by Remi-Gau
1 task done
4
[ENH] Include "goodness of fit" image in GLM reports ? Discussion This issue is used to hold a general discussion on a specific topic where community feedback is desi GLM Issues/PRs related to the nilearn.glm module. Next dev agenda Report
#4525 opened Sep 4, 2024 by Remi-Gau
1 task done
2
refactor matplolib import check Code quality This issue tackles code quality (code refactoring, PEP8...).
#4524 opened Sep 4, 2024 by Remi-Gau
1
Adapt plot_haxby_searchlight_surface example to work with the new surface image API Blocked Documentation for documentation related questions or requests Surface Related to surface data or surface analysis.
#4511 opened Aug 28, 2024 by Remi-Gau
6
add possibility to initialize GLM with "design matrices" (or events) API This issue is related to the Nilearn's API. GLM Issues/PRs related to the nilearn.glm module.
#4505 opened Aug 16, 2024 by Remi-Gau
4
[BUG] threshold_img yields negative cut-off even when two-sided is set to True Plotting The issue is related to plotting functionalities.
#4497 opened Jul 29, 2024 by gurraburra
3 of 9 tasks
1
7
Update internal documentation on how the Doc gets build and deployed. Developer Experience Documentation for documentation related questions or requests Maintenance This issue is related to maintenance work.
#4496 opened Jul 11, 2024 by Remi-Gau
@Remi-Gau
GLM method section GLM Issues/PRs related to the nilearn.glm module. Report
#4493 opened Jul 10, 2024 by Remi-Gau
@Remi-Gau
4
[ENH] Threshold cursor for interactive viewers
#4480 opened Jun 28, 2024 by pbarbarant
1 task done
2
Update the plot_atlas_comparison example to show how to run connectivity on one hemisphere only Documentation for documentation related questions or requests Good first issue Good for newcomers. Equivalent to "very low" effort. hacktoberfest For issues available for the hacktoberfest
#4473 opened Jun 27, 2024 by whsu2s
1 task
@Remi-Gau
12
feature request: pass args to vol_to_surf used in plot_img_on_surf
#4472 opened Jun 27, 2024 by codyvd
6
ProTip! Updated in the last three days: updated:>2024-10-01.