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allow missing site in the reference strain #78

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shajoezhu opened this issue May 24, 2016 · 0 comments
Open

allow missing site in the reference strain #78

shajoezhu opened this issue May 24, 2016 · 0 comments
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shajoezhu commented May 24, 2016 •
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consider to use three states in the reference strain, 0, 1, and 2. where 2 is used for indicate missing, hence the emission should also include for missing state 2. which has 3 states, and 9 states for pair updates
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