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Change the following values to adapt to your project:","#","","PROJECT_MODULE = \"numpy\"","PROJECT_ROOT_FILES = ['numpy', 'LICENSE.txt', 'setup.py']","SAMPLE_TEST = \"numpy/linalg/tests/test_linalg.py:test_byteorder_check\"","SAMPLE_SUBMODULE = \"linalg\"","SAMPLE_NOSE_ARGUMENTS = \"--pdb\"","","EXTRA_PATH = ['/usr/lib/ccache', '/usr/lib/f90cache',"," '/usr/local/lib/ccache', '/usr/local/lib/f90cache']","","# ---------------------------------------------------------------------","","","if __doc__ is None:"," __doc__ = \"Run without -OO if you want usage info\"","else:"," __doc__ = __doc__.format(**globals())","","","import sys","import os","","# In case we are run from the source directory, we don't want to import the","# project from there:","sys.path.pop(0)","","import shutil","import subprocess","import time","from argparse import ArgumentParser, REMAINDER","","ROOT_DIR = os.path.abspath(os.path.join(os.path.dirname(__file__)))","","def main(argv):"," parser = ArgumentParser(usage=__doc__.lstrip())"," parser.add_argument(\"--verbose\", \"-v\", action=\"count\", default=1,"," help=\"more verbosity\")"," parser.add_argument(\"--no-build\", \"-n\", action=\"store_true\", default=False,"," help=\"do not build the project (use system installed version)\")"," parser.add_argument(\"--build-only\", \"-b\", action=\"store_true\", default=False,"," help=\"just build, do not run any tests\")"," parser.add_argument(\"--doctests\", action=\"store_true\", default=False,"," help=\"Run doctests in module\")"," parser.add_argument(\"--coverage\", action=\"store_true\", default=False,"," help=(\"report coverage of project code. HTML output goes \""," \"under build/coverage\"))"," parser.add_argument(\"--gcov\", action=\"store_true\", default=False,"," help=(\"enable C code coverage via gcov (requires GCC). \""," \"gcov output goes to build/**/*.gc*\"))"," parser.add_argument(\"--lcov-html\", action=\"store_true\", default=False,"," help=(\"produce HTML for C code coverage information \""," \"from a previous run with --gcov. \""," \"HTML output goes to build/lcov/\"))"," parser.add_argument(\"--mode\", \"-m\", default=\"fast\","," help=\"'fast', 'full', or something that could be \""," \"passed to nosetests -A [default: fast]\")"," parser.add_argument(\"--submodule\", \"-s\", default=None,"," help=\"Submodule whose tests to run (cluster, constants, ...)\")"," parser.add_argument(\"--pythonpath\", \"-p\", default=None,"," help=\"Paths to prepend to PYTHONPATH\")"," parser.add_argument(\"--tests\", \"-t\", action='append',"," help=\"Specify tests to run\")"," parser.add_argument(\"--python\", action=\"store_true\","," help=\"Start a Python shell with PYTHONPATH set\")"," parser.add_argument(\"--ipython\", \"-i\", action=\"store_true\","," help=\"Start IPython shell with PYTHONPATH set\")"," parser.add_argument(\"--shell\", action=\"store_true\","," help=\"Start Unix shell with PYTHONPATH set\")"," parser.add_argument(\"--debug\", \"-g\", action=\"store_true\","," help=\"Debug build\")"," parser.add_argument(\"--parallel\", \"-j\", type=int, default=0,"," help=\"Number of parallel jobs during build\")"," parser.add_argument(\"--show-build-log\", action=\"store_true\","," help=\"Show build output rather than using a log file\")"," parser.add_argument(\"--bench\", action=\"store_true\","," help=\"Run benchmark suite instead of test suite\")"," parser.add_argument(\"--bench-compare\", action=\"store\", metavar=\"COMMIT\","," help=(\"Compare benchmark results to COMMIT. \""," \"Note that you need to commit your changes first!\"))"," parser.add_argument(\"--raise-warnings\", default=None, type=str,"," choices=('develop', 'release'),"," help=\"if 'develop', warnings are treated as errors\")"," parser.add_argument(\"args\", metavar=\"ARGS\", default=[], nargs=REMAINDER,"," help=\"Arguments to pass to Nose, Python or shell\")"," args = parser.parse_args(argv)",""," if args.bench_compare:"," args.bench = True"," args.no_build = True # ASV does the building",""," if args.lcov_html:"," # generate C code coverage output"," lcov_generate()"," sys.exit(0)",""," if args.pythonpath:"," for p in reversed(args.pythonpath.split(os.pathsep)):"," sys.path.insert(0, p)",""," if args.gcov:"," gcov_reset_counters()",""," if args.debug and args.bench:"," print(\"*** Benchmarks should not be run against debug \""," \"version; remove -g flag ***\")",""," if not args.no_build:"," # we need the noarch path in case the package is pure python."," site_dir, site_dir_noarch = build_project(args)"," sys.path.insert(0, site_dir)"," sys.path.insert(0, site_dir_noarch)"," os.environ['PYTHONPATH'] = site_dir + ':' + site_dir_noarch",""," extra_argv = args.args[:]"," if extra_argv and extra_argv[0] == '--':"," extra_argv = extra_argv[1:]",""," if args.python:"," # Debugging issues with warnings is much easier if you can see them"," print(\"Enabling display of all warnings\")"," import warnings"," import types",""," warnings.filterwarnings(\"always\")"," if extra_argv:"," # Don't use subprocess, since we don't want to include the"," # current path in PYTHONPATH."," sys.argv = extra_argv"," with open(extra_argv[0], 'r') as f:"," script = f.read()"," sys.modules['__main__'] = types.ModuleType('__main__')"," ns = dict(__name__='__main__',"," __file__=extra_argv[0])"," exec_(script, ns)"," sys.exit(0)"," else:"," import code"," code.interact()"," sys.exit(0)",""," if args.ipython:"," # Debugging issues with warnings is much easier if you can see them"," print(\"Enabling display of all warnings and pre-importing numpy as np\")"," import warnings; warnings.filterwarnings(\"always\")"," import IPython"," import numpy as np"," IPython.embed(user_ns={\"np\": np})"," sys.exit(0)",""," if args.shell:"," shell = os.environ.get('SHELL', 'sh')"," print(\"Spawning a Unix shell...\")"," os.execv(shell, [shell] + extra_argv)"," sys.exit(1)",""," if args.coverage:"," dst_dir = os.path.join(ROOT_DIR, 'build', 'coverage')"," fn = os.path.join(dst_dir, 'coverage_html.js')"," if os.path.isdir(dst_dir) and os.path.isfile(fn):"," shutil.rmtree(dst_dir)"," extra_argv += ['--cover-html',"," '--cover-html-dir='+dst_dir]",""," if args.bench:"," # Run ASV"," items = extra_argv"," if args.tests:"," items += args.tests"," if args.submodule:"," items += [args.submodule]",""," bench_args = []"," for a in items:"," bench_args.extend(['--bench', a])",""," if not args.bench_compare:"," cmd = ['asv', 'run', '-n', '-e', '--python=same'] + bench_args"," os.chdir(os.path.join(ROOT_DIR, 'benchmarks'))"," os.execvp(cmd[0], cmd)"," sys.exit(1)"," else:"," commits = [x.strip() for x in args.bench_compare.split(',')]"," if len(commits) == 1:"," commit_a = commits[0]"," commit_b = 'HEAD'"," elif len(commits) == 2:"," commit_a, commit_b = commits"," else:"," p.error(\"Too many commits to compare benchmarks for\")",""," # Check for uncommitted files"," if commit_b == 'HEAD':"," r1 = subprocess.call(['git', 'diff-index', '--quiet',"," '--cached', 'HEAD'])"," r2 = subprocess.call(['git', 'diff-files', '--quiet'])"," if r1 != 0 or r2 != 0:"," print(\"*\"*80)"," print(\"WARNING: you have uncommitted changes --- \""," \"these will NOT be benchmarked!\")"," print(\"*\"*80)",""," # Fix commit ids (HEAD is local to current repo)"," p = subprocess.Popen(['git', 'rev-parse', commit_b],"," stdout=subprocess.PIPE)"," out, err = p.communicate()"," commit_b = out.strip()",""," p = subprocess.Popen(['git', 'rev-parse', commit_a],"," stdout=subprocess.PIPE)"," out, err = p.communicate()"," commit_a = out.strip()",""," cmd = ['asv', 'continuous', '-e', '-f', '1.05',"," commit_a, commit_b] + bench_args"," os.chdir(os.path.join(ROOT_DIR, 'benchmarks'))"," os.execvp(cmd[0], cmd)"," sys.exit(1)",""," test_dir = os.path.join(ROOT_DIR, 'build', 'test')",""," if args.build_only:"," sys.exit(0)"," elif args.submodule:"," modname = PROJECT_MODULE + '.' + args.submodule"," try:"," __import__(modname)"," test = sys.modules[modname].test"," except (ImportError, KeyError, AttributeError):"," print(\"Cannot run tests for %s\" % modname)"," sys.exit(2)"," elif args.tests:"," def fix_test_path(x):"," # fix up test path"," p = x.split(':')"," p[0] = os.path.relpath(os.path.abspath(p[0]),"," test_dir)"," return ':'.join(p)",""," tests = [fix_test_path(x) for x in args.tests]",""," def test(*a, **kw):"," extra_argv = kw.pop('extra_argv', ())"," extra_argv = extra_argv + tests[1:]"," kw['extra_argv'] = extra_argv"," from numpy.testing import Tester"," return Tester(tests[0]).test(*a, **kw)"," else:"," __import__(PROJECT_MODULE)"," test = sys.modules[PROJECT_MODULE].test",""," # Run the tests under build/test"," try:"," shutil.rmtree(test_dir)"," except OSError:"," pass"," try:"," os.makedirs(test_dir)"," except OSError:"," pass",""," cwd = os.getcwd()"," try:"," os.chdir(test_dir)"," result = test(args.mode,"," verbose=args.verbose,"," extra_argv=extra_argv,"," doctests=args.doctests,"," raise_warnings=args.raise_warnings,"," coverage=args.coverage)"," finally:"," os.chdir(cwd)",""," if result.wasSuccessful():"," sys.exit(0)"," else:"," sys.exit(1)","","","def build_project(args):"," \"\"\""," Build a dev version of the project.",""," Returns"," -------"," site_dir"," site-packages directory where it was installed",""," \"\"\"",""," root_ok = [os.path.exists(os.path.join(ROOT_DIR, fn))"," for fn in PROJECT_ROOT_FILES]"," if not all(root_ok):"," print(\"To build the project, run runtests.py in \""," \"git checkout or unpacked source\")"," sys.exit(1)",""," dst_dir = os.path.join(ROOT_DIR, 'build', 'testenv')",""," env = dict(os.environ)"," cmd = [sys.executable, 'setup.py']",""," # Always use ccache, if installed"," env['PATH'] = os.pathsep.join(EXTRA_PATH + env.get('PATH', '').split(os.pathsep))",""," if args.debug or args.gcov:"," # assume everyone uses gcc/gfortran"," env['OPT'] = '-O0 -ggdb'"," env['FOPT'] = '-O0 -ggdb'"," if args.gcov:"," import distutils.sysconfig"," cvars = distutils.sysconfig.get_config_vars()"," env['OPT'] = '-O0 -ggdb'"," env['FOPT'] = '-O0 -ggdb'"," env['CC'] = cvars['CC'] + ' --coverage'"," env['CXX'] = cvars['CXX'] + ' --coverage'"," env['F77'] = 'gfortran --coverage '"," env['F90'] = 'gfortran --coverage '"," env['LDSHARED'] = cvars['LDSHARED'] + ' --coverage'"," env['LDFLAGS'] = \" \".join(cvars['LDSHARED'].split()[1:]) + ' --coverage'",""," cmd += [\"build\"]"," if args.parallel \u003e 1:"," cmd += [\"-j\", str(args.parallel)]"," # Install; avoid producing eggs so numpy can be imported from dst_dir."," cmd += ['install', '--prefix=' + dst_dir,"," '--single-version-externally-managed',"," '--record=' + dst_dir + 'tmp_install_log.txt']",""," from distutils.sysconfig import get_python_lib"," site_dir = get_python_lib(prefix=dst_dir, plat_specific=True)"," site_dir_noarch = get_python_lib(prefix=dst_dir, plat_specific=False)"," # easy_install won't install to a path that Python by default cannot see"," # and isn't on the PYTHONPATH. Plus, it has to exist."," if not os.path.exists(site_dir):"," os.makedirs(site_dir)"," if not os.path.exists(site_dir_noarch):"," os.makedirs(site_dir_noarch)"," env['PYTHONPATH'] = site_dir + ':' + site_dir_noarch",""," log_filename = os.path.join(ROOT_DIR, 'build.log')",""," if args.show_build_log:"," ret = subprocess.call(cmd, env=env, cwd=ROOT_DIR)"," else:"," log_filename = os.path.join(ROOT_DIR, 'build.log')"," print(\"Building, see build.log...\")"," with open(log_filename, 'w') as log:"," p = subprocess.Popen(cmd, env=env, stdout=log, stderr=log,"," cwd=ROOT_DIR)",""," # Wait for it to finish, and print something to indicate the"," # process is alive, but only if the log file has grown (to"," # allow continuous integration environments kill a hanging"," # process accurately if it produces no output)"," last_blip = time.time()"," last_log_size = os.stat(log_filename).st_size"," while p.poll() is None:"," time.sleep(0.5)"," if time.time() - last_blip \u003e 60:"," log_size = os.stat(log_filename).st_size"," if log_size \u003e last_log_size:"," print(\" ... build in progress\")"," last_blip = time.time()"," last_log_size = log_size",""," ret = p.wait()",""," if ret == 0:"," print(\"Build OK\")"," else:"," if not args.show_build_log:"," with open(log_filename, 'r') as f:"," print(f.read())"," print(\"Build failed!\")"," sys.exit(1)",""," return site_dir, site_dir_noarch","","","#","# GCOV support","#","def gcov_reset_counters():"," print(\"Removing previous GCOV .gcda files...\")"," build_dir = os.path.join(ROOT_DIR, 'build')"," for dirpath, dirnames, filenames in os.walk(build_dir):"," for fn in filenames:"," if fn.endswith('.gcda') or fn.endswith('.da'):"," pth = os.path.join(dirpath, fn)"," os.unlink(pth)","","#","# LCOV support","#","","LCOV_OUTPUT_FILE = os.path.join(ROOT_DIR, 'build', 'lcov.out')","LCOV_HTML_DIR = os.path.join(ROOT_DIR, 'build', 'lcov')","","def lcov_generate():"," try: os.unlink(LCOV_OUTPUT_FILE)"," except OSError: pass"," try: 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