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2020 – today
- 2023
[c3]Russell Z. Kunes, Mingzhang Yin, Max Land, Doron Haviv, Dana Pe'er, Simon Tavaré:
Gradient Estimation for Binary Latent Variables via Gradient Variance Clipping. AAAI 2023: 8405-8412- 2022
- [j25]Simon Tavaré
:
A note on the Screaming Toes game. J. Appl. Probab. 59(1): 118-130 (2022) - [i1]Russell Z. Kunes, Mingzhang Yin, Max Land, Doron Haviv, Dana Pe'er, Simon Tavaré:
Gradient Estimation for Binary Latent Variables via Gradient Variance Clipping. CoRR abs/2208.06124 (2022)
2010 – 2019
- 2016
- [j24]Anestis Touloumis, John C. Marioni, Simon Tavaré:
HDTD: analyzing multi-tissue gene expression data. Bioinform. 32(14): 2193-2195 (2016) - 2014
- [j23]Ernest Turro, William J. Astle, Simon Tavaré:
Flexible analysis of RNA-seq data using mixed effects models. Bioinform. 30(2): 180-188 (2014) - [j22]Alexandra Jauhiainen, Basetti Madhu, Masako Narita, Masashi Narita, John Griffiths, Simon Tavaré:
Normalization of metabolomics data with applications to correlation maps. Bioinform. 30(15): 2155-2161 (2014) - 2013
- [j21]Reza Ardekani, Anna K. Greenwood, Catherine L. Peichel, Simon Tavaré:
Automated quantification of the schooling behaviour of sticklebacks. EURASIP J. Image Video Process. 2013: 61 (2013) - 2011
- [j20]Jonathan M. Cairns, Christiana Spyrou, Rory Stark, Mike L. Smith, Andy G. Lynch, Simon Tavaré:
BayesPeak - an R package for analysing ChIP-seq data. Bioinform. 27(5): 713-714 (2011) - [j19]Andrea Sottoriva, Louis Vermeulen, Simon Tavaré:
Modeling Evolutionary Dynamics of Epigenetic Mutations in Hierarchically Organized Tumors. PLoS Comput. Biol. 7(5) (2011) - 2010
- [j18]Sergii Ivakhno, Simon Tavaré:
CNAnova: a new approach for finding recurrent copy number abnormalities in cancer SNP microarray data. Bioinform. 26(11): 1395-1402 (2010) - [j17]Sergii Ivakhno, Tom Royce, Anthony J. Cox, Dirk J. Evers, R. Keira Cheetham, Simon Tavaré:
CNAseg - a novel framework for identification of copy number changes in cancer from second-generation sequencing data. Bioinform. 26(24): 3051-3058 (2010) - [j16]Mike L. Smith, Mark J. Dunning, Simon Tavaré, Andy G. Lynch:
Identification and correction of previously unreported spatial phenomena using raw Illumina BeadArray data. BMC Bioinform. 11: 208 (2010) - [j15]Matthew E. Ritchie, Matthew S. Forrest, Antigone S. Dimas, Caroline Daelemans, Emmanouil T. Dermitzakis, Panagiotis Deloukas, Simon Tavaré:
Data analysis issues for allele-specific expression using Illumina's GoldenGate assay. BMC Bioinform. 11: 280 (2010) - [c2]Andrea Sottoriva, Simon Tavaré:
Integrating Approximate Bayesian Computation with Complex Agent-Based Models for Cancer Research. COMPSTAT 2010: 57-66
2000 – 2009
- 2009
- [j14]Matthew E. Ritchie, Benilton S. Carvalho, Kurt N. Hetrick, Simon Tavaré, Rafael A. Irizarry:
R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips. Bioinform. 25(19): 2621-2623 (2009) - [j13]Christiana Spyrou, Rory Stark, Andy G. Lynch, Simon Tavaré:
BayesPeak: Bayesian analysis of ChIP-seq data. BMC Bioinform. 10: 299 (2009) - [j12]Simon R. V. Knott, Christopher J. Viggiani, Oscar M. Aparicio, Simon Tavaré:
Strategies for analyzing highly enriched IP-chip datasets. BMC Bioinform. 10: 305 (2009) - [j11]Dhruv Grover, Simon Tavaré:
Finding Behavioral Motifs in Fly Trajectories. Commun. Inf. Syst. 9(3): 283-294 (2009) - 2008
- [j10]Mark J. Dunning, Nuno L. Barbosa-Morais, Andy G. Lynch, Simon Tavaré, Matthew E. Ritchie:
Statistical issues in the analysis of Illumina data. BMC Bioinform. 9 (2008) - 2007
- [j9]Mark J. Dunning, Mike L. Smith, Matthew E. Ritchie, Simon Tavaré:
beadarray: R classes and methods for Illumina bead-based data. Bioinform. 23(16): 2183-2184 (2007) - [j8]Dmitriy Skvortsov, Diana Abdueva, Michael E. Stitzer, Steven E. Finkel, Simon Tavaré:
Using expression arrays for copy number detection: an example from E. coli. BMC Bioinform. 8 (2007) - [j7]Pierre Nicolas, Kyoung-Mee Kim, Darryl Shibata, Simon Tavaré:
The Stem Cell Population of the Human Colon Crypt: Analysis via Methylation Patterns. PLoS Comput. Biol. 3(3) (2007) - 2006
- [j6]John C. Marioni, Natalie P. Thorne, Simon Tavaré:
BioHMM: a heterogeneous hidden Markov model for segmenting array CGH data. Bioinform. 22(9): 1144-1146 (2006) - [j5]Richard Arratia, Andrew D. Barbour, Simon Tavaré:
A Tale of Three Couplings: Poisson-Dirichlet and GEM Approximations for Random Permutations. Comb. Probab. Comput. 15(1-2): 31-62 (2006) - 2001
- [c1]Simon Tavaré, Dean C. Adams, Olivier Fedrigo, Gavin J. P. Naylor:
A Model for Phylogenetic Inference Using Structural and Chemical Covariates. Pacific Symposium on Biocomputing 2001: 215-225 - 2000
- [j4]Sophie Schbath, Nathalie Bossard, Simon Tavaré:
The Effect of Nonhomogeneous Clone Length Distribution on the Progress of an STS Mapping Project. J. Comput. Biol. 7(1-2): 47-57 (2000)
1990 – 1999
- 1999
- [j3]Richard Arratia, Andrew D. Barbour, Simon Tavaré:
The Poisson-Dirichlet Distribution And The Scale-Invariant Poisson Process. Comb. Probab. Comput. 8(5): 407-416 (1999) - 1994
- [j2]Andrew D. Barbour, Simon Tavaré:
A Rate for the Erdös-Turán Law. Comb. Probab. Comput. 3: 167-176 (1994) - 1992
- [j1]Richard Arratia, Simon Tavaré:
Limit Theorems for Combinatorial Structures via Discrete Process Approximations. Random Struct. Algorithms 3(3): 321-346 (1992)
Coauthor Index
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