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ORCIDNoah M. Daniels
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2020 – today
- 2024
[i7]Morgan E. Prior, Thomas J. Howard III, Emily Light, Najib Ishaq, Noah M. Daniels:
Generalized compression and compressive search of large datasets. CoRR abs/2409.12161 (2024)- 2023
- [c15]Liam Strand, Andrew Powers, Polina Shpilker
, Lenore Cowen, Alva L. Couch, Noah M. Daniels:
Context-Sensitive Editing for the MEDFORD Metadata Language. MTSR 2023: 278-283 - [i6]Morgan E. Prior, Thomas J. Howard III, Oliver McLaughlin, Najib Ishaq, Noah M. Daniels:
CLAM-Accelerated K-Nearest Neighbors Entropy-Scaling Search of Large High-Dimensional Datasets via an Actualization of the Manifold Hypothesis. CoRR abs/2309.05491 (2023) - 2022
- [j6]Polina Shpilker, John Freeman, Hailey McKelvie, Jill Ashey, Jay-Miguel Fonticella, Hollie Putnam, Jane Greenberg, Lenore Cowen, Alva L. Couch, Noah M. Daniels:
MEDFORD: A human- and machine-readable metadata markup language. Database J. Biol. Databases Curation 2022(2022) (2022) - [c14]Yana Hrytsenko, Noah M. Daniels, Rachel S. Schwartz:
Determining population structure from k-mer frequencies. BCB 2022: 60:1 - [i5]Polina Shpilker, John Freeman, Hailey McKelvie, Jill Ashey, Jay-Miguel Fonticella, Hollie Putnam, Jane Greenberg, Lenore J. Cowen, Alva L. Couch, Noah M. Daniels:
MEDFORD: A human and machine readable metadata markup language. CoRR abs/2204.09610 (2022) - 2021
- [c13]Najib Ishaq, Thomas J. Howard III, Noah M. Daniels:
Clustered Hierarchical Anomaly and Outlier Detection Algorithms. IEEE BigData 2021: 5163-5174 - [c12]Polina Shpilker, John Freeman, Hailey McKelvie, Jill Ashey, Jay-Miguel Fonticella, Hollie Putnam, Jane Greenberg, Lenore Cowen, Alva L. Couch, Noah M. Daniels:
MEtaData Format for Open Reef Data (MEDFORD). MTSR 2021: 206-211 - [i4]Najib Ishaq, Thomas J. Howard III, Noah M. Daniels:
Clustered Hierarchical Anomaly and Outlier Detection Algorithms. CoRR abs/2103.11774 (2021)
2010 – 2019
- 2019
- [c11]Najib Ishaq, George Student, Noah M. Daniels:
Clustered Hierarchical Entropy-Scaling Search of Astronomical and Biological Data. IEEE BigData 2019: 780-789 - [c10]Najib Ishaq, George Student, Noah M. Daniels:
Clustered Hierarchical Entropy-Scaling Search of Astronomical and Biological Data. IEEE BigData 2019: 6077 - [i3]Najib Ishaq, George Student, Noah M. Daniels:
Clustered Hierarchical Entropy-Scaling Search of Astronomical and Biological Data. CoRR abs/1908.08551 (2019) - 2018
- [c9]Yana Hrytsenko, Noah M. Daniels, Rachel S. Schwartz:
Efficient Distance Calculations Between Genomes Using Mathematical Approximation. BCB 2018: 546 - 2017
- [c8]Olivia M. Ahern, Rebecca J. Stevick, Li Yuan, Noah M. Daniels:
Analysis of 16S Genomic Data using Graphical Databases. BCB 2017: 599 - [c7]Timothy Leonard, Lutz Hamel, Noah M. Daniels, Natallia V. Katenka:
Assortative Mixture of English Parts of Speech. COMPLEX NETWORKS 2017: 463-475 - 2016
- [j5]Bonnie Berger, Noah M. Daniels:
Computational biology in the 21st century: scaling with compressive algorithms. Commun. ACM 59(8): 72-80 (2016) - [c6]Claudio Alberti, Noah M. Daniels, Mikel Hernaez, Jan Voges, Rachel L. Goldfeder, Ana A. Hernandez-Lopez, Marco Mattavelli, Bonnie Berger:
An Evaluation Framework for Lossy Compression of Genome Sequencing Quality Values. DCC 2016: 221-230 - 2015
- [j4]Noah M. Daniels, Andrew Gallant, Norman Ramsey, Lenore J. Cowen:
MRFy: Remote Homology Detection for Beta-Structural Proteins Using Markov Random Fields and Stochastic Search. IEEE ACM Trans. Comput. Biol. Bioinform. 12(1): 4-16 (2015) - [i2]Yun William Yu, Noah M. Daniels, David Christian Danko, Bonnie Berger:
Entropy-scaling search of massive biological data. CoRR abs/1503.05638 (2015) - 2013
- [j3]Noah M. Daniels, Andrew Gallant, Jian Peng, Lenore J. Cowen, Michael Baym, Bonnie Berger:
Compressive genomics for protein databases. Bioinform. 29(13): 283-290 (2013) - [c5]Noah M. Daniels, Andrew Gallant, Norman Ramsey, Lenore J. Cowen:
MRFy: Remote Homology Detection for Beta-Structural Proteins Using Markov Random Fields and Stochastic Search. BCB 2013: 133 - [i1]Noah M. Daniels:
Remote Homology Detection in Proteins Using Graphical Models. CoRR abs/1304.6476 (2013) - 2012
- [j2]Noah M. Daniels, Raghavendra Hosur, Bonnie Berger, Lenore J. Cowen:
SMURFLite: combining simplified Markov random fields with simulated evolution improves remote homology detection for beta-structural proteins into the twilight zone. Bioinform. 28(9): 1216-1222 (2012) - [j1]Noah M. Daniels, Shilpa Nadimpalli, Lenore J. Cowen:
Formatt: Correcting Protein Multiple Structural Alignments by Incorporating Sequence Alignment. BMC Bioinform. 13: 259 (2012) - [c4]Noah M. Daniels, Andrew Gallant, Norman Ramsey:
Experience report: Haskell in computational biology. ICFP 2012: 227-234 - 2011
- [c3]Shilpa Nadimpalli, Noah M. Daniels, Lenore Cowen:
Formatt: correcting protein multiple structural alignments by sequence peeking. BCB 2011: 315-319 - 2010
- [c2]Noah M. Daniels, Anoop Kumar, Lenore Cowen, Matthew Menke:
Touring Protein Space with Matt. ISBRA 2010: 18-28
2000 – 2009
- 2001
- [c1]Alva L. Couch, Noah M. Daniels:
The Maelstrom: Network Service Debugging via "Ineffective Procedures". LISA 2001: 63-78
Coauthor Index
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