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ORCIDPavel S. Novichkov
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2010 – 2019
- 2015
[c2]Xin-Yi Chua
, Lawrence Buckingham, James M. Hogan, Pavel S. Novichkov:
Large Scale Comparative Visualisation of Regulatory Networks with TRNDiff. ICCS 2015: 713-724- 2014
- [j12]Serdar Turkarslan, Elisabeth J. Wurtmann, Wei-Ju Wu, Ning Jiang, J. Christopher Bare, Karen Foley, David J. Reiss, Pavel S. Novichkov, Nitin S. Baliga:
Network portal: a database for storage, analysis and visualization of biological networks. Nucleic Acids Res. 42(Database-Issue): 184-190 (2014) - 2012
- [j11]Pavel S. Novichkov, Thomas S. Brettin, Elena S. Novichkova, Paramvir S. Dehal, Adam P. Arkin, Inna Dubchak, Dmitry A. Rodionov:
RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics. Nucleic Acids Res. 40(Web-Server-Issue): 604-608 (2012) - [c1]Elena D. Stavrovskaya, Andrey A. Mironov, Dmitry A. Rodionov, Inna Dubchak, Pavel S. Novichkov:
Automated Regulon Content Prediction and Estimation of PWM Quality. BIOINFORMATICS 2012: 322-325 - 2011
- [j10]Igor Lukashin, Pavel S. Novichkov, Dario Boffelli, Alex R. Paciorkowski, Simon Minovitsky, Song Yang, Inna Dubchak:
VISTA Region Viewer (RViewer) - a computational system for prioritizing genomic intervals for biomedical studies. Bioinform. 27(18): 2595-2597 (2011) - 2010
- [j9]Pavel S. Novichkov, Olga N. Laikova, Elena S. Novichkova, Mikhail S. Gelfand, Adam P. Arkin, Inna Dubchak, Dmitry A. Rodionov:
RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes. Nucleic Acids Res. 38(Database-Issue): 111-118 (2010) - [j8]Paramvir S. Dehal, Marcin P. Joachimiak, Morgan N. Price, John T. Bates, Jason K. Baumohl, Dylan Chivian, Greg D. Friedland, Katherine H. Huang, Keith Keller, Pavel S. Novichkov, Inna Dubchak, Eric J. Alm, Adam P. Arkin:
MicrobesOnline: an integrated portal for comparative and functional genomics. Nucleic Acids Res. 38(Database-Issue): 396-400 (2010) - [j7]Pavel S. Novichkov, Dmitry A. Rodionov, Elena D. Stavrovskaya, Elena S. Novichkova, Alexei E. Kazakov, Mikhail S. Gelfand, Adam P. Arkin, Andrey A. Mironov, Inna Dubchak:
RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach. Nucleic Acids Res. 38(Web-Server-Issue): 299-307 (2010)
2000 – 2009
- 2009
- [j6]Pavel S. Novichkov, Igor Ratnere, Yuri I. Wolf, Eugene V. Koonin, Inna Dubchak:
ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes. Nucleic Acids Res. 37(Database-Issue): 448-454 (2009) - 2007
- [j5]Alexei E. Kazakov, Michael J. Cipriano, Pavel S. Novichkov, Simon Minovitsky, Dmitry V. Vinogradov, Adam P. Arkin, Andrey A. Mironov, Mikhail S. Gelfand, Inna Dubchak:
RegTransBase - a database of regulatory sequences and interactions in a wide range of prokaryotic genomes. Nucleic Acids Res. 35(Database-Issue): 407-412 (2007) - 2004
- [j4]Olga V. Kalinina, Pavel S. Novichkov, Andrey A. Mironov, Mikhail S. Gelfand, Aleksandra B. Rakhmaninova:
SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins. Nucleic Acids Res. 32(Web-Server-Issue): 424-428 (2004) - 2001
- [j3]Andrey A. Mironov, Pavel S. Novichkov, Mikhail S. Gelfand:
Pro-Frame: similarity-based gene recognition in eukaryotic DNA sequences with errors. Bioinform. 17(1): 13-15 (2001) - [j2]Pavel S. Novichkov, Mikhail S. Gelfand, Andrey A. Mironov:
Gene recognition in eukaryotic DNA by comparison of genomic sequences. Bioinform. 17(11): 1011-1018 (2001) - 2000
- [j1]Mikhail S. Gelfand, Pavel S. Novichkov, Elena S. Novichkova, Andrey A. Mironov:
Comparative Analysis of Regulatory Patterns in Bacterial Genomes. Briefings Bioinform. 1(4): 357-371 (2000)
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