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ORCIDMartin Maska
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2020 – today
- 2023
[j8]Lucia Hradecká
, David Wiesner, Jakub Sumbal, Zuzana Sumbalova Koledova, Martin Maska:
Segmentation and Tracking of Mammary Epithelial Organoids in Brightfield Microscopy. IEEE Trans. Medical Imaging 42(1): 281-290 (2023)- 2022
- [d1]Carlos Castilla, Martin Maska, Dmitry V. Sorokin, Erik Meijering, Carlos Ortiz-de-Solorzano:
Datasets used in "3-D quantification of filopodia in motile cancer cells" IEEE Transactions on Medical Imaging 38(3), 862-872 (2019). IEEE DataPort, 2022
- 2020
- [j7]Ulysse Rubens, Romain Mormont, Lassi Paavolainen, Volker Bäcker, Benjamin Pavie, Leandro A. Scholz, Gino Michiels, Martin Maska, Devrim Ünay, Graeme Ball, Renaud Hoyoux, Rémy Vandaele, Ofra Golani, Stefan G. Stanciu, Natasa Sladoje, Perrine Paul-Gilloteaux, Raphaël Marée, Sébastien Tosi:
BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows. Patterns 1(3): 100040 (2020)
2010 – 2019
- 2019
- [j6]David Wiesner, David Svoboda, Martin Maska, Michal Kozubek:
CytoPacq: a web-interface for simulating multi-dimensional cell imaging. Bioinform. 35(21): 4531-4533 (2019) - [j5]Carlos Castilla, Martin Maska, Dmitry V. Sorokin, Erik Meijering, Carlos Ortiz-de-Solorzano:
3-D Quantification of Filopodia in Motile Cancer Cells. IEEE Trans. Medical Imaging 38(3): 862-872 (2019) - [c21]Martin Maska, Tereza Necasová, David Wiesner, Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda:
Toward Robust Fully 3D Filopodium Segmentation and Tracking in Time-Lapse Fluorescence Microscopy. ICIP 2019: 819-823 - 2018
- [j4]Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda, Tereza Necasová, Katsiarina Morgaenko, Lívia Eiselleová, Lenka Tesarová, Martin Maska:
FiloGen: A Model-Based Generator of Synthetic 3-D Time-Lapse Sequences of Single Motile Cells With Growing and Branching Filopodia. IEEE Trans. Medical Imaging 37(12): 2630-2641 (2018) - [c20]Cem Emre Akbas, Vladimír Ulman, Martin Maska, Florian Jug, Michal Kozubek:
Automatic Fusion of Segmentation and Tracking Labels. ECCV Workshops (6) 2018: 446-454 - [c19]Carlos Castilla, Martin Maska, Dmitry V. Sorokin, Erik Meijering, Carlos Ortiz-de-Solorzano:
Segmentation of actin-stained 3D fluorescent cells with filopodial protrusions using convolutional neural networks. ISBI 2018: 413-417 - [c18]Igor Peterlík, David Svoboda, Vladimír Ulman, Dmitry V. Sorokin, Martin Maska:
Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Multiple Mutually Interacting Motile Cells with Filopodia. SASHIMI@MICCAI 2018: 71-79 - 2017
- [c17]Martin Maska, Pavel Matula:
Particle Tracking Accuracy Measurement Based on Comparison of Linear Oriented Forests. ICCV Workshops 2017: 11-17 - [c16]Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda, Martin Maska:
Model-based generation of synthetic 3D time-lapse sequences of motile cells with growing filopodia. ISBI 2017: 822-826 - 2016
- [c15]Karel Stepka, Martin Maska, Jakub Jozef Pálenik, Vendula Pospíchalová, Anna Kotrbová, Ladislav Ilkovics, Dobromila Klemová, Ales Hampl, Vítezslav Bryja, Pavel Matula:
Automatic Detection and Segmentation of Exosomes in Transmission Electron Microscopy. ECCV Workshops (1) 2016: 318-325 - 2015
- [c14]María Anguiano, Carlos Castilla, Martin Maska, Cristina Ederra, Javier Fernández-Marqués, Rafael Peláez, Ana Rouzaut, Arrate Muñoz-Barrutia, Michal Kozubek, Carlos Ortiz-de-Solorzano:
Characterization of the role of collagen network structure and composition in cancer cell migration. EMBC 2015: 8139-8142 - [c13]Martin Maska, Cristina Ederra, Javier Fernández-Marqués, Arrate Muñoz-Barrutia, Michal Kozubek, Carlos Ortiz-de-Solorzano:
Quantification of the 3D collagen network geometry in confocal reflection microscopy. ICIP 2015: 1791-1794 - 2014
- [j3]Martin Maska, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M. W. Balak, Pavel Karas, Tereza Bolcková, Markéta Streitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E. G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Krízek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, María J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek, Carlos Ortiz-de-Solorzano:
A benchmark for comparison of cell tracking algorithms. Bioinform. 30(11): 1609-1617 (2014) - [c12]David Svoboda, Vladimír Ulman, Ludek Matyska, Martin Maska, Jan Bella, Stanislav Stejskal:
On proper simulation of phenomena influencing image formation in fluorescence microscopy. ICIP 2014: 3944-3948 - 2013
- [j2]Martin Maska, Ondrej Danek, Saray Garasa, Ana Rouzaut, Arrate Muñoz-Barrutia, Carlos Ortiz-de-Solorzano:
Segmentation and Shape Tracking of Whole Fluorescent Cells Based on the Chan-Vese Model. IEEE Trans. Medical Imaging 32(6): 995-1006 (2013) - [c11]Martin Maska, Xabier Morales, Arrate Muñoz-Barrutia, Ana Rouzaut, Carlos Ortiz-de-Solorzano:
Automatic quantification of filopodia-based cell migration. ISBI 2013: 668-671 - 2012
- [j1]Ondrej Danek, Pavel Matula, Martin Maska, Michal Kozubek:
Smooth Chan-Vese segmentation via graph cuts. Pattern Recognit. Lett. 33(10): 1405-1410 (2012) - [c10]Martin Maska, Arrate Muñoz-Barrutia, Carlos Ortiz-de-Solorzano:
Fast tracking of fluorescent cells based on the Chan-Vese model. ISBI 2012: 1316-1319 - 2010
- [c9]Martin Maska, Pavel Matula, Ondrej Danek, Michal Kozubek:
A Fast Level Set-Like Algorithm for Region-Based Active Contours. ISVC (3) 2010: 387-396 - [c8]Ondrej Danek, Martin Maska:
A Simple Topology Preserving Max-Flow Algorithm for Graph Cut Based Image Segmentation. MEMICS 2010: 19-25 - [c7]Martin Maska, Pavel Matula, Michal Kozubek:
Simultaneous Tracking of Multiple Objects Using Fast Level Set-Like Algorithm. MEMICS 2010: 69-76
2000 – 2009
- 2009
- [c6]Martin Maska, Pavel Matula:
A Fast Level Set-Like Algorithm with Topology Preserving Constraint. CAIP 2009: 930-938 - [c5]Pavel Matula, Martin Maska, Ondrej Danek, Petr Matula, Michal Kozubek:
Acquiarium: Free Software for the Acquisition and Analysis of 3D Images of Cells in Fluorescence Microscopy. ISBI 2009: 1138-1141 - [c4]Martin Maska, Ondrej Danek, Carlos Ortiz-de-Solorzano, Arrate Muñoz-Barrutia, Michal Kozubek, Ignacio Fernández García:
A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms. SCIA 2009: 390-399 - [c3]Ondrej Danek, Pavel Matula, Carlos Ortiz-de-Solorzano, Arrate Muñoz-Barrutia, Martin Maska, Michal Kozubek:
Segmentation of Touching Cell Nuclei Using a Two-Stage Graph Cut Model. SCIA 2009: 410-419 - 2007
- [c2]David Svoboda, Marek Kasík, Martin Maska, Jan Hubený, Stanislav Stejskal, Michal Zimmermann:
On Simulating 3D Fluorescent Microscope Images. CAIP 2007: 309-316 - [c1]Martin Maska, Jan Hubený, David Svoboda, Michal Kozubek:
A Comparison of Fast Level Set-Like Algorithms for Image Segmentation in Fluorescence Microscopy. ISVC (2) 2007: 571-581
Coauthor Index
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