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2020 – today
- 2024
[j52]Irena Roterman
, Leszek Konieczny, Katarzyna Stapor:
The outer-membrane componentof the multi-drug efflux system -a structural analysis based onhydrophobicity distribution. Bio Algorithms Med Syst. 20(1): 1-14 (2024)- 2023
- [j51]Irena Roterman, Katarzyna Stapor, Leszek Konieczny:
Ab initio protein structure prediction: the necessary presence of external force field as it is delivered by Hsp40 chaperone. BMC Bioinform. 24(1): 418 (2023) - [j50]Irena Roterman, Katarzyna Stapor, Leszek Konieczny:
Role of environmental specificity in CASP results. BMC Bioinform. 24(1): 425 (2023) - [j49]Irena Roterman, Leszek Konieczny:
Protein Is an Intelligent Micelle. Entropy 25(6): 850 (2023) - 2021
- [j48]Mateusz Banach, Katarzyna Stapor, Piotr Fabian, Leszek Konieczny, Irena Roterman:
Divergence Entropy-Based Evaluation of Hydrophobic Core in Aggressive and Resistant Forms of Transthyretin. Entropy 23(4): 458 (2021) - 2020
- [j47]Irena Roterman, Leszek Konieczny:
Protein folding vs. COVID-19 and the Mediterranean diet. Bio Algorithms Med Syst. 16(2) (2020) - [j46]Krzysztof Mikuta, Leszek Konieczny, Irena Roterman:
System to simulate the activity of living organism - construction of proteome. J. Comput. Sci. 45: 101195 (2020) - [j45]Piotr Fabian, Katarzyna Stapor, Mateusz Banach, Magdalena Ptak-Kaczor, Leszek Konieczny, Irena Roterman:
Alternative Hydrophobic Core in Proteins - The Effect of Specific Synergy. Symmetry 12(2): 273 (2020) - [j44]Mateusz Banach, Piotr Fabian, Katarzyna Stapor, Leszek Konieczny, Magdalena Ptak-Kaczor, Irena Roterman:
The Status of Edge Strands in Ferredoxin-Like Fold. Symmetry 12(6): 1032 (2020)
2010 – 2019
- 2019
- [j43]Irena Roterman, Leszek Konieczny:
The living organism: evolutionary design or an accident. Bio Algorithms Med Syst. 15(3) (2019) - [j42]Leszek Konieczny, Irena Roterman:
Personalized precision medicine. Bio Algorithms Med Syst. 15(4) (2019) - [j41]Irena Roterman, Dawid Dulak, Malgorzata Gadzala, Mateusz Banach, Leszek Konieczny:
Structural analysis of the Aβ(11-42) amyloid fibril based on hydrophobicity distribution. J. Comput. Aided Mol. Des. 33(7): 665-675 (2019) - [j40]Mateusz Banach, Leszek Konieczny, Irena Roterman:
Symmetry and Dissymmetry in Protein Structure - System-Coding Its Biological Specificity. Symmetry 11(10): 1215 (2019) - 2018
- [j39]Grazyna Drabik, Jolanta Kaszuba-Zwoinska, Zdzislaw Wisniowski, Leszek Konieczny, Irena Roterman:
Chromatin 3D - will it make understanding of cancer transformation finally possible? Bio Algorithms Med Syst. 14(1) (2018) - [j38]Dawid Dulak, Mateusz Banach, Zdzislaw Wisniowski, Leszek Konieczny, Irena Roterman:
Comparison of the structure of Aβ(1-40) amyloid with the one in complex with polyphenol ε-viniferin glucoside (EVG). Bio Algorithms Med Syst. 14(2) (2018) - [j37]Mateusz Banach, Leszek Konieczny, Zdzislaw Wisniowski, Irena Roterman:
Fragment Aβ(18-41) presented within the CDR3 loop region of a shark immunoglobulin new antigen receptor single-variable domain antibody analyzed based on the fuzzy oil drop model. Bio Algorithms Med Syst. 14(3) (2018) - 2017
- [j36]Mateusz Banach, Leszek Konieczny, Zdzislaw Wisniowski, Irena Roterman:
Structure of hydrophobic core in plant carboxylesterase. Bio Algorithms Med Syst. 13(1): 13-16 (2017) - [j35]Mateusz Banach, Zdzislaw Wisniowski, Barbara Kalinowska, Leszek Konieczny, Irena Roterman:
The variability of protein structure with respect to the hydrophobic core. Bio Algorithms Med Syst. 13(2): 63 (2017) - [j34]Maria Golda, Mateusz Banach, Zdzislaw Wisniowski, Wojciech Ziajka, Leszek Konieczny, Irena Roterman:
Role of the hydrophobic core in cytoskeleton protein: cardiac myosin binding protein C. Bio Algorithms Med Syst. 13(3): 161-165 (2017) - [j33]Dawid Dulak, Mateusz Banach, Zdzislaw Wisniowski, Leszek Konieczny, Irena Roterman:
Mechanism of ligand binding - PDZ domain taken as example. Bio Algorithms Med Syst. 13(4): 175-178 (2017) - [j32]Magdalena Ptak, Mateusz Banach, Zdzislaw Wisniowski, Leszek Konieczny, Irena Roterman:
Chain-chain complexation and heme binding in haemoglobin with respect to the hydrophobic core structure. Bio Algorithms Med Syst. 13(4): 179-185 (2017) - [j31]Irena Roterman, Mateusz Banach, Leszek Konieczny:
Application of the Fuzzy Oil Drop Model Describes Amyloid as a Ribbonlike Micelle. Entropy 19(4): 167 (2017) - 2016
- [j30]Mateusz Banach, Leszek Konieczny, Irena Roterman:
Dissimilar sequence: similar structure of proteins. Bio Algorithms Med Syst. 12(3): 117-121 (2016) - [j29]Mateusz Banach, Barbara Kalinowska, Leszek Konieczny, Irena Roterman:
Role of Disulfide Bonds in Stabilizing the Conformation of Selected Enzymes - An Approach Based on Divergence Entropy Applied to the Structure of Hydrophobic Core in Proteins. Entropy 18(3): 67 (2016) - [j28]Irena Roterman, Mateusz Banach, Barbara Kalinowska, Leszek Konieczny:
Influence of the Aqueous Environment on Protein Structure - A Plausible Hypothesis Concerning the Mechanism of Amyloidogenesis. Entropy 18(10): 351 (2016) - 2015
- [j27]Katarzyna Chlopas, Anna Jagusiak, Leszek Konieczny, Barbara Piekarska, Irena Roterman, Janina Rybarska, Barbara Stopa, Grzegorz Zemanek, Elzbieta Bielanska, Piotr Piwowar, Krystyna Sadlik:
The use of Titan yellow dye as a metal ion binding marker for studies on the formation of specific complexes by supramolecular Congo red. Bio Algorithms Med Syst. 11(1): 9-17 (2015) - [j26]Irena Roterman-Konieczna, Mateusz Banach, Leszek Konieczny:
Hydrophobic core structure of macromomycin - the apoprotein of the antitumor antibiotic auromomycin - fuzzy oil drop model applied. Bio Algorithms Med Syst. 11(3): 177-181 (2015) - [j25]Barbara Kalinowska, Mateusz Banach, Leszek Konieczny, Irena Roterman:
Application of Divergence Entropy to Characterize the Structure of the Hydrophobic Core in DNA Interacting Proteins. Entropy 17(3): 1477-1507 (2015) - 2014
- [j24]Monika Piwowar, Jacek Dygut, Piotr Piwowar, Leszek Konieczny, Irena Roterman:
Attempt at a systemic outlook on aging and carcinogenesis. Bio Algorithms Med Syst. 10(3): 101-115 (2014) - 2013
- [j23]Monika Piwowar, Mateusz Banach, Leszek Konieczny, Jacques Chomilier, Irena Roterman:
Structural role of exons in hemoglobin. Bio Algorithms Med Syst. 9(2): 81-90 (2013) - [j22]Monika Piwowar, Mateusz Banach, Leszek Konieczny, Irena Roterman:
Structural role of exon-coded fragments in proteins. Bio Algorithms Med Syst. 9(3): 103-114 (2013) - 2012
- [j21]Leszek Konieczny, Mateusz Banach, Irena Roterman:
Stability of Two Natural Homologous Proteins with Different Folds. Bio Algorithms Med Syst. 8(2): 185-193 (2012) - [j20]Pawel Spólnik, Leszek Konieczny, Irena Roterman, Michal Markiewicz:
BIOLOGICAL CLOCK - Is the Need for a Clock a Common Issue for Cells and Computers? Bio Algorithms Med Syst. 8(2): 255-265 (2012) - [j19]Leszek Konieczny, Michal Markiewicz, Piotr Piwowar, Irena Roterman:
Technical Solutions for Bio-Measurements. Bio Algorithms Med Syst. 8(4): 339-349 (2012) - 2011
- [j18]Pawel Spólnik, Leszek Konieczny, Barbara Piekarska, Janina Rybarska, Barbara Stopa, Grzegorz Zemanek:
The criteria of life and aging from a molecular viewpoint. The role of protein aggregation in the process of aging. Bio Algorithms Med Syst. 7(1): 23-30 (2011) - 2010
- [j17]Pawel Spólnik, Leszek Konieczny:
The criterion of biological life in the developing robot era. Bio Algorithms Med Syst. 6(12-S): 181-182 (2010)
2000 – 2009
- 2007
- [j16]Michal Brylinski, Leszek Konieczny, Irena Roterman:
Is the protein folding an aim-oriented process? Human haemoglobin as example. Int. J. Bioinform. Res. Appl. 3(2): 234-260 (2007) - [j15]Michal Brylinski, Katarzyna Prymula, Wiktor Jurkowski, Marek Kochanczyk, Ewa Stawowczyk, Leszek Konieczny, Irena Roterman:
Prediction of Functional Sites Based on the Fuzzy Oil Drop Model. PLoS Comput. Biol. 3(5) (2007) - 2006
- [j14]Joanna Grabska-Chrzastowska, Anna Drozd, Leszek Konieczny, Janina Rybarska, Barbara Stopa, Barbara Piekarska, Irena Roterman, Marcin Król, Pawel Spólnik, Grzegorz Zemanek:
Specific supramolecular ligands with proteins. Possible practical application. Bio Algorithms Med Syst. 1(1-2): 113-116 (2006) - [j13]Joanna Rybarska, Pawel Spólnik, Anna Drozd, Leszek Konieczny, Barbara Piekarska, Barbara Stopa, Grzegorz Zemanek, Marcin Król, Irena Roterman-Konieczna:
Protein complexes with supramolecular ligands formed and revealed in two-dimensional electrophoresis. The search for computer analysis of results. Bio Algorithms Med Syst. 1(1-2): 133-138 (2006) - [j12]Anna Drozd, Leszek Konieczny, Barbara Piekarska, Janina Rybarska, Barbara Stopa, Grzegorz Zemanek:
How specially adapted chromatographic bed material might be used for the controlled formation of immune complexes and studies of congo red binding to bivalent antibodies. Bio Algorithms Med Syst. 2(4): 25-28 (2006) - [j11]Michal Brylinski, Leszek Konieczny, Irena Roterman:
Hydrophobic collapse in (in silico) protein folding. Comput. Biol. Chem. 30(4): 255-267 (2006) - [j10]Leszek Konieczny, Michal Brylinski, Irena Roterman:
Gauss-Function-Based Model of Hydrophobicity Density in Proteins. Silico Biol. 6(1-2): 15-22 (2006) - [j9]Michal Brylinski, Marek Kochanczyk, Leszek Konieczny, Irena Roterman:
Sequence-Structure-Function Relation Characterized in silico. Silico Biol. 6(6): 589-600 (2006) - 2004
- [j8]Michal Brylinski, Wiktor Jurkowski, Leszek Konieczny, Irena Roterman:
Limited conformational space for early-stage protein folding simulation. Bioinform. 20(2): 199-205 (2004) - [j7]Michal Brylinski, Leszek Konieczny, Irena Roterman:
SPI - Structure predictability index for protein sequences. Silico Biol. 5(3): 227-237 (2004) - [j6]Marcin Król, Tomasz Borowski, Irena Roterman, Barbara Piekarska, Barbara Stopa, Joanna Rybarska, Leszek Konieczny:
Force-field parametrization and molecular dynamics simulations of Congo red. J. Comput. Aided Mol. Des. 18(1): 41-53 (2004) - 2003
- [j5]Jacek Leluk, Leszek Konieczny, Irena Roterman:
Search for structural similarity in proteins. Bioinform. 19(1): 117-124 (2003) - 2000
- [j4]Marek Skowronek, Irena Roterman, Leszek Konieczny, Barbara Stopa, Janina Rybarska, Barbara Piekarska, Andrzej Górecki, Marek Król:
The Conformational Characteristics of Congo Red, Evans Blue and Trypan Blue. Comput. Chem. 24(3-4): 429-450 (2000) - [j3]Marek Skowronek, Irena Roterman, Leszek Konieczny, Barbara Stopa, Janina Rybarska, Barbara Piekarska:
Why do Congo Red, Evans Blue, and Trypan Blue differ in their complexation properties? J. Comput. Chem. 21(8): 656-667 (2000)
1990 – 1999
- 1998
- [j2]Irena Roterman, Janina Rybarska, Leszek Konieczny, Marek Skowronek, Barbara Stopa, Barbara Piekarska, Grzegorz Bakalarski:
Congo Red Bound to -1-Proteinase Inhibitor As a Model of Supramolecular Ligand and Protein Complex. Comput. Chem. 22(1): 61-70 (1998) - 1995
- [j1]Irena Roterman, Leszek Konieczny:
Geometrical Analysis of Structural Changes in Immunoglobulin Domains' Transition From Native to Molten State. Comput. Chem. 19(3): 247-252 (1995)
Coauthor Index
aka: Irena Roterman
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last updated on 2024-10-07 21:22 CEST by the dblp team
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