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ORCIDAntonio Foncubierta-Rodríguez
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2020 – today
- 2024
[j8]Niharika Shimona D'Souza, Hongzhi Wang, Andrea Giovannini, Antonio Foncubierta-Rodríguez
, Kristen L. Beck, Orest B. Boyko, Tanveer F. Syeda-Mahmood:
Fusing modalities by multiplexed graph neural networks for outcome prediction from medical data and beyond. Medical Image Anal. 93: 103064 (2024)- 2023
- [c32]Niharika Shimona D'Souza, Hongzhi Wang, Andrea Giovannini, Antonio Foncubierta-Rodríguez, Kristen L. Beck, Orest B. Boyko, Tanveer F. Syeda-Mahmood:
MaxCorrMGNN: A Multi-graph Neural Network Framework for Generalized Multimodal Fusion of Medical Data for Outcome Prediction. ML4MHD 2023: 141-154 - [i14]Niharika Shimona D'Souza, Hongzhi Wang, Andrea Giovannini, Antonio Foncubierta-Rodríguez, Kristen L. Beck, Orest B. Boyko, Tanveer F. Syeda-Mahmood:
MaxCorrMGNN: A Multi-Graph Neural Network Framework for Generalized Multimodal Fusion of Medical Data for Outcome Prediction. CoRR abs/2307.07093 (2023) - 2022
- [j7]Nadia Brancati, Anna Maria Anniciello, Pushpak Pati, Daniel Riccio, Giosuè Scognamiglio, Guillaume Jaume, Giuseppe De Pietro, Maurizio Di Bonito, Antonio Foncubierta, Gerardo Botti, Maria Gabrani, Florinda Feroce, Maria Frucci:
BRACS: A Dataset for BReAst Carcinoma Subtyping in H&E Histology Images. Database J. Biol. Databases Curation 2022(2022) (2022) - [j6]Pushpak Pati, Guillaume Jaume, Antonio Foncubierta-Rodríguez, Florinda Feroce, Anna Maria Anniciello, Giosue Scognamiglio, Nadia Brancati, Maryse Fiche, Estelle Dubruc, Daniel Riccio, Maurizio Di Bonito, Giuseppe De Pietro, Gerardo Botti, Jean-Philippe Thiran, Maria Frucci, Orcun Goksel, Maria Gabrani:
Hierarchical graph representations in digital pathology. Medical Image Anal. 75: 102264 (2022) - [c31]Niharika Shimona D'Souza, Hongzhi Wang, Andrea Giovannini, Antonio Foncubierta-Rodríguez, Kristen L. Beck, Orest B. Boyko, Tanveer F. Syeda-Mahmood:
Fusing Modalities by Multiplexed Graph Neural Networks for Outcome Prediction in Tuberculosis. MICCAI (8) 2022: 287-297 - [i13]Niharika Shimona D'Souza, Hongzhi Wang, Andrea Giovannini, Antonio Foncubierta-Rodríguez, Kristen L. Beck, Orest B. Boyko, Tanveer F. Syeda-Mahmood:
Fusing Modalities by Multiplexed Graph Neural Networks for Outcome Prediction in Tuberculosis. CoRR abs/2210.14377 (2022) - 2021
- [j5]Pushpak Pati, Antonio Foncubierta-Rodríguez, Orcun Goksel, Maria Gabrani:
Reducing annotation effort in digital pathology: A Co-Representation learning framework for classification tasks. Medical Image Anal. 67: 101859 (2021) - [c30]Antonio Foncubierta-Rodríguez, Pushpak Pati, Guillaume Jaume, Maria Gabrani:
Histocartography: a pipeline for histology image analysis. AMIA 2021 - [c29]Guillaume Jaume, Pushpak Pati, Valentin Anklin, Antonio Foncubierta, Maria Gabrani:
HistoCartography: A Toolkit for Graph Analytics in Digital Pathology. COMPAY@MICCAI 2021: 117-128 - [c28]Guillaume Jaume, Pushpak Pati, Behzad Bozorgtabar, Antonio Foncubierta, Anna Maria Anniciello, Florinda Feroce, Tilman Rau, Jean-Philippe Thiran, Maria Gabrani, Orcun Goksel:
Quantifying Explainers of Graph Neural Networks in Computational Pathology. CVPR 2021: 8106-8116 - [c27]Valentin Anklin, Pushpak Pati, Guillaume Jaume, Behzad Bozorgtabar, Antonio Foncubierta-Rodríguez, Jean-Philippe Thiran, Mathilde Sibony, Maria Gabrani, Orcun Goksel:
Learning Whole-Slide Segmentation from Inexact and Incomplete Labels Using Tissue Graphs. MICCAI (2) 2021: 636-646 - [c26]Hung-Chun Hsu, Hung-Wen Tsai, Maria Gabrani, Pau-Choo Chung, Antonio Foncubierta-Rodríguez, Yu-Ting Wu:
Using Stain Decomposition for Nucleus Segmentation on Multisource H&E Slide Images. SSCI 2021: 1-7 - [i12]Pushpak Pati, Guillaume Jaume, Antonio Foncubierta, Florinda Feroce, Anna Maria Anniciello, Giosuè Scognamiglio, Nadia Brancati, Maryse Fiche, Estelle Dubruc, Daniel Riccio, Maurizio Di Bonito, Giuseppe De Pietro, Gerardo Botti, Jean-Philippe Thiran, Maria Frucci, Orcun Goksel, Maria Gabrani:
Hierarchical Cell-to-Tissue Graph Representations for Breast Cancer Subtyping in Digital Pathology. CoRR abs/2102.11057 (2021) - [i11]Valentin Anklin, Pushpak Pati, Guillaume Jaume, Behzad Bozorgtabar, Antonio Foncubierta-Rodríguez, Jean-Philippe Thiran, Mathilde Sibony, Maria Gabrani, Orcun Goksel:
Learning Whole-Slide Segmentation from Inexact and Incomplete Labels using Tissue Graphs. CoRR abs/2103.03129 (2021) - [i10]Guillaume Jaume, Pushpak Pati, Valentin Anklin, Antonio Foncubierta, Maria Gabrani:
HistoCartography: A Toolkit for Graph Analytics in Digital Pathology. CoRR abs/2107.10073 (2021) - [i9]Nadia Brancati, Anna Maria Anniciello, Pushpak Pati, Daniel Riccio, Giosuè Scognamiglio, Guillaume Jaume, Giuseppe De Pietro, Maurizio Di Bonito, Antonio Foncubierta, Gerardo Botti, Maria Gabrani, Florinda Feroce, Maria Frucci:
BRACS: A Dataset for BReAst Carcinoma Subtyping in H&E Histology Images. CoRR abs/2111.04740 (2021) - 2020
- [c25]Pushpak Pati, Antonio Foncubierta-Rodríguez, Orçun Göksel, Maria Gabrani:
Mitosis Detection Under Limited Annotation: A Joint Learning Approach. ISBI 2020: 486-489 - [c24]Pushpak Pati, Guillaume Jaume, Lauren Alisha Fernandes, Antonio Foncubierta-Rodríguez, Florinda Feroce, Anna Maria Anniciello, Giosue Scognamiglio, Nadia Brancati, Daniel Riccio, Maurizio Di Bonito, Giuseppe De Pietro, Gerardo Botti, Orcun Goksel, Jean-Philippe Thiran, Maria Frucci, Maria Gabrani:
HACT-Net: A Hierarchical Cell-to-Tissue Graph Neural Network for Histopathological Image Classification. UNSURE/GRAIL@MICCAI 2020: 208-219 - [i8]Pushpak Pati, Antonio Foncubierta-Rodríguez, Orçun Göksel, Maria Gabrani:
Mitosis Detection Under Limited Annotation: A Joint Learning Approach. CoRR abs/2006.09772 (2020) - [i7]Ting-An Yen, Hung-Chun Hsu, Pushpak Pati, Maria Gabrani, Antonio Foncubierta-Rodríguez, Pau-Choo Chung:
NINEPINS: Nuclei Instance Segmentation with Point Annotations. CoRR abs/2006.13556 (2020) - [i6]Guillaume Jaume, Pushpak Pati, Antonio Foncubierta-Rodríguez, Florinda Feroce, Giosue Scognamiglio, Anna Maria Anniciello, Jean-Philippe Thiran, Orcun Goksel, Maria Gabrani:
Towards Explainable Graph Representations in Digital Pathology. CoRR abs/2007.00311 (2020) - [i5]Pushpak Pati, Guillaume Jaume, Lauren Alisha Fernandes, Antonio Foncubierta, Florinda Feroce, Anna Maria Anniciello, Giosue Scognamiglio, Nadia Brancati, Daniel Riccio, Maurizio Di Bonito, Giuseppe De Pietro, Gerardo Botti, Orcun Goksel, Jean-Philippe Thiran, Maria Frucci, Maria Gabrani:
HACT-Net: A Hierarchical Cell-to-Tissue Graph Neural Network for Histopathological Image Classification. CoRR abs/2007.00584 (2020) - [i4]Nik Dennler, Antonio Foncubierta-Rodríguez, Titus Neupert, Marilyne Sousa:
Learning-based Defect Recognition for Quasi-Periodic Microscope Images. CoRR abs/2007.01309 (2020) - [i3]Parthasarathy Suryanarayanan, Bhavani Iyer, Prithwish Chakraborty, Bibo Hao, Italo Buleje, Piyush Madan, James V. Codella, Antonio Foncubierta, Divya Pathak, Sarah Miller, Amol Rajmane, Shannon Harrer, Gigi Yuan-Reed, Daby Sow:
A Canonical Architecture For Predictive Analytics on Longitudinal Patient Records. CoRR abs/2007.12780 (2020) - [i2]Guillaume Jaume, Pushpak Pati, Behzad Bozorgtabar, Antonio Foncubierta-Rodríguez, Florinda Feroce, Anna Maria Anniciello, Tilman Rau, Jean-Philippe Thiran, Maria Gabrani, Orcun Goksel:
Quantifying Explainers of Graph Neural Networks in Computational Pathology. CoRR abs/2011.12646 (2020)
2010 – 2019
- 2017
- [c23]Antonio Foncubierta-Rodríguez, Anca-Nicoleta Ciubotaru, Costas Bekas, Maria Gabrani:
Extracting Information from Molecular Pathway Diagrams. GREC 2017: 99-114 - [c22]Waleed Farrukh, Antonio Foncubierta-Rodríguez, Anca-Nicoleta Ciubotaru, Guillaume Jaume, Costas Bekas, Orçun Göksel, Maria Gabrani:
Interpreting Data from Scanned Tables. GREC@ICDAR 2017: 5-6 - [c21]Antonio Foncubierta-Rodríguez, Anca-Nicoleta Ciubotaru, Costas Bekas, Maria Gabrani:
Extracting Interactions from Molecular Pathways. GREC@ICDAR 2017: 11-12 - [p3]Orcun Goksel, Antonio Foncubierta-Rodríguez:
VISCERAL Anatomy Benchmarks for Organ Segmentation and Landmark Localization: Tasks and Results. Cloud-Based Benchmarking of Medical Image Analysis 2017: 107-125 - [p2]Oscar Alfonso Jiménez del Toro, Henning Müller, Antonio Foncubierta-Rodríguez, Georg Langs, Allan Hanbury:
Retrieval of Medical Cases for Diagnostic Decisions: VISCERAL Retrieval Benchmark. Cloud-Based Benchmarking of Medical Image Analysis 2017: 127-141 - [i1]Antonio Foncubierta-Rodríguez, Henning Müller, Adrien Depeursinge:
From visual words to a visual grammar: using language modelling for image classification. CoRR abs/1703.05571 (2017) - 2016
- [j4]Oscar Alfonso Jiménez del Toro, Henning Müller, Markus Krenn, Katharina Gruenberg, Abdel Aziz Taha, Marianne Winterstein, Ivan Eggel, Antonio Foncubierta-Rodríguez, Orcun Goksel, András Jakab, Georgios Kontokotsios, Georg Langs, Bjoern H. Menze, Tomas Salas Fernandez, Roger Schaer, Anna Walleyo, Marc-André Weber, Yashin Dicente Cid, Tobias Gass, Mattias P. Heinrich, Fucang Jia, Fredrik Kahl, Razmig Kéchichian, Dominic Mai, Assaf B. Spanier, Graham Vincent, Chunliang Wang, Daniel Wyeth, Allan Hanbury:
Cloud-Based Evaluation of Anatomical Structure Segmentation and Landmark Detection Algorithms: VISCERAL Anatomy Benchmarks. IEEE Trans. Medical Imaging 35(11): 2459-2475 (2016) - 2015
- [c20]Henning Müller, Oscar Alfonso Jiménez del Toro, Allan Hanbury, Georg Langs, Antonio Foncubierta-Rodríguez:
Overview of the First Workshop of Muldimodal Retrieval in the Medical Domain (MRMD 2015). MRDM@ECIR 2015: 1-7 - [c19]Alba Garcia Seco de Herrera, Dimitrios Markonis, Ranveer Joyseeree, Roger Schaer, Antonio Foncubierta-Rodríguez, Henning Müller:
Semi-supervised Learning for Image Modality Classification. MRDM@ECIR 2015: 85-98 - [c18]Oscar Alfonso Jiménez del Toro, Allan Hanbury, Georg Langs, Antonio Foncubierta-Rodríguez, Henning Müller:
Overview of the VISCERAL Retrieval Benchmark 2015. MRDM@ECIR 2015: 115-123 - [c17]Henning Müller, Oscar Alfonso Jiménez del Toro, Allan Hanbury, Georg Langs, Antonio Foncubierta-Rodríguez:
Workshop Multimodal Retrieval in the Medical Domain (MRMD) 2015. ECIR 2015: 834-837 - [c16]Orcun Goksel, Antonio Foncubierta-Rodríguez, Oscar Alfonso Jiménez del Toro, Henning Müller, Georg Langs, Marc-André Weber, Bjoern H. Menze, Ivan Eggel, Katharina Gruenberg, Marianne Winterstein, Markus Holzer, Markus Krenn, Georgios Kontokotsios, Sokratis Metallidis, Roger Schaer, Abdel Aziz Taha, András Jakab, Tomas Salas Fernandez, Allan Hanbury:
Overview of the VISCERAL Challenge at ISBI 2015. VISCERAL Challenge@ISBI 2015: 6-11 - [c15]Oscar Alfonso Jiménez del Toro, Antonio Foncubierta-Rodríguez, Adrien Depeursinge, Henning Müller:
Texture classification of anatomical structures in CT using a context-free machine learning approach. Medical Imaging: Computer-Aided Diagnosis 2015: 94140W - [c14]Yashin Dicente Cid, Adrien Depeursinge, Antonio Foncubierta-Rodríguez, Alexandra Platon, Pierre-Alexandre Poletti, Henning Müller:
Pulmonary embolism detection using localized vessel-based features in dual energy CT. Medical Imaging: Computer-Aided Diagnosis 2015: 941407 - [p1]Antonio Foncubierta-Rodríguez, Alba Garcia Seco de Herrera, Henning Müller:
Meaningful Bags of Words for Medical Image Classification and Retrieval. Health Monitoring and Personalized Feedback using Multimedia Data 2015: 73-93 - [e2]Henning Müller, Oscar Alfonso Jiménez del Toro, Allan Hanbury, Georg Langs, Antonio Foncubierta-Rodríguez:
Multimodal Retrieval in the Medical Domain - First International Workshop, MRMD 2015, Vienna, Austria, March 29, 2015, Revised Selected Papers. Lecture Notes in Computer Science 9059, Springer 2015, ISBN 978-3-319-24470-9 [contents] - [e1]Orcun Goksel, Oscar Alfonso Jiménez del Toro, Antonio Foncubierta-Rodríguez, Henning Müller:
Proceedings of the VISCERAL Anatomy3 Organ Segmentation Challenge co-located with IEEE International Symposium on Biomedical Imaging (ISBI 2015), Brooklyn, NY, USA, April 16, 2015. CEUR Workshop Proceedings 1390, CEUR-WS.org 2015 [contents] - 2014
- [j3]Adrien Depeursinge, Antonio Foncubierta-Rodríguez, Dimitri Van De Ville, Henning Müller:
Three-dimensional solid texture analysis in biomedical imaging: Review and opportunities. Medical Image Anal. 18(1): 176-196 (2014) - [j2]Antonio Foncubierta-Rodríguez, Henning Müller, Adrien Depeursinge:
Retrieval of high-dimensional visual data: current state, trends and challenges ahead. Multim. Tools Appl. 69(2): 539-567 (2014) - [j1]Adrien Depeursinge, Antonio Foncubierta-Rodríguez, Dimitri Van De Ville, Henning Müller:
Rotation-Covariant Texture Learning Using Steerable Riesz Wavelets. IEEE Trans. Image Process. 23(2): 898-908 (2014) - [c13]Antonio Foncubierta-Rodríguez, Antoine Widmer, Adrien Depeursinge, Henning Müller:
Enhanced visualization of pulmonary perfusion in 4D Dual Energy CT images. EMBC 2014: 6710-6713 - 2013
- [c12]Antonio Foncubierta-Rodríguez, Oscar Alfonso Jiménez del Toro, Alexandra Platon, Pierre-Alexandre Poletti, Henning Müller, Adrien Depeursinge:
Benefits of texture analysis of dual energy CT for Computer-Aided pulmonary embolism detection. EMBC 2013: 3973-3976 - [c11]Adrien Depeursinge, Antonio Foncubierta-Rodríguez, Alejandro Vargas, Dimitri Van De Ville, Alexandra Platon, Pierre-Alexandre Poletti, Henning Müller:
Rotation-covariant texture analysis of 4D dual-energy CT as an indicator of local pulmonary perfusion. ISBI 2013: 145-148 - [c10]Niraj Aswani, Thomas Beckers, Erich Birngruber, Célia Boyer, Andreas Burner, Jakub Bystron, Khalid Choukri, Sarah Cruchet, Hamish Cunningham, Jan Dedek, Ljiljana Dolamic, René Donner, Sebastian Dungs, Ivan Eggel, Antonio Foncubierta-Rodríguez, Norbert Fuhr, Adam Funk, Alba Garcia Seco de Herrera, Arnaud Gaudinat, Georgi Georgiev, Julien Gobeill, Lorraine Goeuriot, Paz Gomez, Robert Mark Greenwood, Manfred Gschwandtner, Allan Hanbury, Jan Hajic, Jaroslava Hlavácová, Markus Holzer, Gareth J. F. Jones, Blanca Jordan, Matthias Jordan, Klemens Kaderk, Franz Kainberger, Liadh Kelly, Sascha Kriewel, Marlene Kritz, Georg Langs, Nolan Lawson, Dimitrios Markonis, Iván Martínez, Vassil Momtchev, Alexandre Masselot, Hélène Mazo, Henning Müller, João R. M. Palotti, Pavel Pecina, Konstantin Pentchev, Deyan Peychev, Natalia Pletneva, Diana Pottecher, Angus Roberts, Patrick Ruch, Alexander Sachs, Matthias Samwald, Priscille Schneller, Veronika Stefanov, Miguel Angel Tinte, Zdenka Uresová, Alejandro Vargas, Dina Vishnyakova:
Khresmoi - Multilingual Semantic Search of Medical Text and Images. MedInfo 2013: 1266 - [c9]Alba Garcia Seco de Herrera, Antonio Foncubierta-Rodríguez, Emanuele Schiavi, Henning Müller:
2D-Based 3D Volume Retrieval Using Singular Value Decomposition of Detected Regions. MCV 2013: 185-195 - [c8]Oscar Alfonso Jiménez del Toro, Antonio Foncubierta-Rodríguez, María Isabel Vargas Gómez, Henning Müller, Adrien Depeursinge:
Epileptogenic Lesion Quantification in MRI Using Contralateral 3D Texture Comparisons. MICCAI (2) 2013: 353-360 - [c7]Antonio Foncubierta-Rodríguez, Alba Garcia Seco de Herrera, Henning Müller:
Medical image retrieval using bag of meaningful visual words: unsupervised visual vocabulary pruning with PLSA. MIIRH@ACM Multimedia 2013: 75-82 - 2012
- [c6]Antonio Foncubierta-Rodríguez, Alejandro Vargas, Alexandra Platon, Pierre-Alexandre Poletti, Henning Müller, Adrien Depeursinge:
Retrieval of 4D Dual Energy CT for Pulmonary Embolism Diagnosis. MCBR-CDS 2012: 45-55 - [c5]Adrien Depeursinge, Antonio Foncubierta-Rodríguez, Dimitri Van De Ville, Henning Müller:
Multiscale Lung Texture Signature Learning Using the Riesz Transform. MICCAI (3) 2012: 517-524 - [c4]Antonio Foncubierta-Rodríguez, Adrien Depeursinge, Laura Gui, Henning Müller:
Three dimensional multi-scale visual words for texture-based cerebellum segmentation. Medical Imaging: Image Processing 2012: 83142Z - [c3]Antonio Foncubierta-Rodríguez, Henning Müller:
Ground truth generation in medical imaging: a crowdsourcing-based iterative approach. CrowdMM@ACM Multimedia 2012: 9-14 - 2011
- [c2]Antonio Foncubierta-Rodríguez, Adrien Depeursinge, Henning Müller:
Using Multiscale Visual Words for Lung Texture Classification and Retrieval. MCBR-CDS 2011: 69-79 - [c1]Adrien Depeursinge, Antonio Foncubierta-Rodríguez, Dimitri Van De Ville, Henning Müller:
Lung Texture Classification Using Locally-Oriented Riesz Components. MICCAI (3) 2011: 231-238
Coauthor Index
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