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Michiel Schaap
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2020 – today
- 2024
- [c21]James Batten, Matthew Sinclair, Ying Bai, Ben Glocker, Michiel Schaap:
Image-To-Tree with Recursive Prompting. ISBI 2024: 1-5 - [i7]Karim Kadry, Shreya Gupta, Jonas Sogbadji, Michiel Schaap, Kersten Petersen, Takuya Mizukami, Carlos Collet, Farhad Rikhtegar Nezami, Elazer R. Edelman:
A Diffusion Model for Simulation Ready Coronary Anatomy with Morpho-skeletal Control. CoRR abs/2407.15631 (2024) - 2023
- [d1]James Batten
, Ben Glocker
, Michiel Schaap:
Simple Synthetic Angiography 0.1. Zenodo, 2023 - [i6]Karim Kadry, Abhishek Karmakar, Andreas Schuh, Kersten Petersen, Michiel Schaap, David Marlevi, Charles A. Taylor, Elazer R. Edelman, Farhad Rikhtegar Nezami
:
Morphology-based non-rigid registration of coronary computed tomography and intravascular images through virtual catheter path optimization. CoRR abs/2301.00060 (2023) - [i5]James Batten, Matthew Sinclair, Ben Glocker, Michiel Schaap:
Image To Tree with Recursive Prompting. CoRR abs/2301.00447 (2023) - 2022
- [j18]Matthew Sinclair
, Andreas Schuh
, Karl Hahn
, Kersten Petersen
, Ying Bai
, James Batten
, Michiel Schaap, Ben Glocker
:
Atlas-ISTN: Joint segmentation, registration and atlas construction with image-and-spatial transformer networks. Medical Image Anal. 78: 102383 (2022) - 2020
- [i4]Matthew Sinclair, Andreas Schuh, Karl Hahn, Kersten Petersen, Ying Bai, James Batten, Michiel Schaap, Ben Glocker:
Atlas-ISTN: Joint Segmentation, Registration and Atlas Construction with Image-and-Spatial Transformer Networks. CoRR abs/2012.10533 (2020)
2010 – 2019
- 2019
- [j17]Jo Schlemper
, Ozan Oktay, Michiel Schaap
, Mattias P. Heinrich
, Bernhard Kainz
, Ben Glocker
, Daniel Rueckert
:
Attention gated networks: Learning to leverage salient regions in medical images. Medical Image Anal. 53: 197-207 (2019) - [j16]Clara Jaquet
, Laurent Najman
, Hugues Talbot
, Leo J. Grady, Michiel Schaap, Buzzy Spain, Hyun Jin Kim
, Irene E. Vignon-Clementel
, Charles A. Taylor:
Generation of Patient-Specific Cardiac Vascular Networks: A Hybrid Image-Based and Synthetic Geometric Model. IEEE Trans. Biomed. Eng. 66(4): 946-955 (2019) - [j15]Matthew C. H. Lee
, Kersten Petersen
, Nick Pawlowski
, Ben Glocker
, Michiel Schaap:
TeTrIS: Template Transformer Networks for Image Segmentation With Shape Priors. IEEE Trans. Medical Imaging 38(11): 2596-2606 (2019) - [c20]Matthew C. H. Lee, Ozan Oktay, Andreas Schuh, Michiel Schaap, Ben Glocker:
Image-and-Spatial Transformer Networks for Structure-Guided Image Registration. MICCAI (2) 2019: 337-345 - [i3]Matthew C. H. Lee, Ozan Oktay, Andreas Schuh, Michiel Schaap, Ben Glocker:
Image-and-Spatial Transformer Networks for Structure-Guided Image Registration. CoRR abs/1907.09200 (2019) - [i2]Sethuraman Sankaran, David Lesage, Rhea Tombropoulos, Nan Xiao, Hyun Jin Kim, David Spain, Michiel Schaap, Charles A. Taylor:
Physics driven reduced order model for real time blood flow simulations. CoRR abs/1911.01543 (2019) - 2018
- [i1]Jo Schlemper, Ozan Oktay, Michiel Schaap, Mattias P. Heinrich, Bernhard Kainz, Ben Glocker, Daniel Rueckert:
Attention Gated Networks: Learning to Leverage Salient Regions in Medical Images. CoRR abs/1808.08114 (2018) - 2016
- [c19]Sethuraman Sankaran, Michiel Schaap, Stanley C. Hunley, James K. Min, Charles A. Taylor, Leo J. Grady:
HALE: Healthy Area of Lumen Estimation for Vessel Stenosis Quantification. MICCAI (3) 2016: 380-387 - 2013
- [j14]Hortense A. Kirisli, Michiel Schaap, Coert Metz, A. S. Dharampal, W. B. Meijboom, S. L. Papadopoulou
, A. Dedic, K. Nieman, Michiel A. de Graaf, M. F. L. Meijs, M. J. Cramer, Alexander Broersen, Suheyla Cetin, Abouzar Eslami, Leonardo Floréz-Valencia
, Kuo-Lung Lor, Bogdan J. Matuszewski, Imen Melki, Brian Mohr, Ilkay Öksüz
, Rahil Khurram Shahzad, Chunliang Wang, Pieter H. Kitslaar, Gözde B. Ünal
, Amin Katouzian, Maciej Orkisz
, Chung-Ming Chen, Frédéric Precioso, Laurent Najman
, S. Masood, Devrim Ünay, Lucas J. van Vliet
, Rodrigo Moreno
, Roman Goldenberg
, Erald Vuçini, Gabriel P. Krestin, Wiro J. Niessen
, Theo van Walsum
:
Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography. Medical Image Anal. 17(8): 859-876 (2013) - [j13]Coert Metz, Michiel Schaap, Stefan Klein
, Nora Baka, Lisan Neefjes, Carl J. Schultz
, Wiro J. Niessen
, Theo van Walsum
:
Registration of 3D+t Coronary CTA and Monoplane 2D+t X-Ray Angiography. IEEE Trans. Medical Imaging 32(5): 919-931 (2013) - [c18]Jung W. Suh, Michiel Schaap, Ann Lee, Nam Do, Alexis Ahiekpor-Dravi, Ying Bai, Gilwoo Choi, Romain Moreau-Gobard:
Automatic multi-atlas segmentation using dual registrations. ISBI 2013: 1284-1287 - 2012
- [j12]Hortense A. Kirisli, Vikas Gupta, Sharon W. Kirschbaum, Alexia Rossi
, Coert Metz, Michiel Schaap, Robert Jan van Geuns, Nico Mollet, Boudewijn P. F. Lelieveldt
, Johan H. C. Reiber, Theo van Walsum
, Wiro J. Niessen
:
Comprehensive visualization of multimodal cardiac imaging data for assessment of coronary artery disease: first clinical results of the SMARTVis tool. Int. J. Comput. Assist. Radiol. Surg. 7(4): 557-571 (2012) - [j11]Alfonso A. Isola, Coert Metz, Michiel Schaap, Stefan Klein
, Michael Grass, Wiro J. Niessen
:
Cardiac motion-corrected iterative cone-beam CT reconstruction using a semi-automatic minimum cost path-based coronary centerline extraction. Comput. Medical Imaging Graph. 36(3): 215-226 (2012) - [j10]Hui Tang, Theo van Walsum
, Robbert S. van Onkelen, Reinhard Hameeteman, Stefan Klein
, Michiel Schaap, Fufa L. Tori, Quirijn J. A. van den Bouwhuijsen, Jacqueline C. M. Witteman, Aad van der Lugt, Lucas J. van Vliet
, Wiro J. Niessen
:
Semiautomatic carotid lumen segmentation for quantification of lumen geometry in multispectral MRI. Medical Image Anal. 16(6): 1202-1215 (2012) - [j9]Coert Metz, Nora Baka, Hortense A. Kirisli, Michiel Schaap, Stefan Klein
, Lisan Neefjes, Nico Mollet, Boudewijn P. F. Lelieveldt
, Marleen de Bruijne
, Wiro J. Niessen
, Theo van Walsum
:
Regression-Based Cardiac Motion Prediction From Single-Phase CTA. IEEE Trans. Medical Imaging 31(6): 1311-1325 (2012) - [j8]Nora Baka, Marleen de Bruijne
, Theo van Walsum
, Bart L. Kaptein
, J. E. Giphart, Michiel Schaap, Wiro J. Niessen
, Boudewijn P. F. Lelieveldt
:
Statistical Shape Model-Based Femur Kinematics From Biplane Fluoroscopy. IEEE Trans. Medical Imaging 31(8): 1573-1583 (2012) - [c17]Rahil Khurram Shahzad, Michiel Schaap, Frederico Bastos Goncalves
, Coert Metz, Hui Tang, Theo van Walsum, Adriaan Moelker, Lucas J. van Vliet
, Wiro J. Niessen
:
Automatic detection of calcified lesions in the descending aorta using contrast enhanced CT scans. ISBI 2012: 250-253 - [c16]Hui Tang, Theo van Walsum, Reinhard Hameeteman, Michiel Schaap, Aad van der Lugt, Lucas J. van Vliet
, Wiro J. Niessen
:
Lumen segmentation of atherosclerotic carotid arteries in CTA. ISBI 2012: 274-277 - 2011
- [j7]Coert Metz, Stefan Klein
, Michiel Schaap, Theo van Walsum
, Wiro J. Niessen
:
Nonrigid registration of dynamic medical imaging data using nD + t B-splines and a groupwise optimization approach. Medical Image Anal. 15(2): 238-249 (2011) - [j6]K. Hameeteman, Maria A. Zuluaga
, Moti Freiman
, Leo Joskowicz
, Olivier Cuisenaire
, Leonardo Floréz-Valencia, Mehmet Akif Gülsün, Karl Krissian, Julien Mille, Wilbur C. K. Wong, Maciej Orkisz
, Hüseyin Tek, Marcela Hernández Hoyos, Fethallah Benmansour, Albert C. S. Chung, Sietske Rozie, M. van Gils, L. van den Borne, Jacob Sosna, Phillip M. Berman, N. Cohen, Philippe Douek, I. Sánchez, M. Aissat, Michiel Schaap, Coert Metz, Gabriel P. Krestin, Aad van der Lugt, Wiro J. Niessen
, Theo van Walsum
:
Evaluation framework for carotid bifurcation lumen segmentation and stenosis grading. Medical Image Anal. 15(4): 477-488 (2011) - [j5]Renske de Boer, Michiel Schaap, Fedde van der Lijn, Henri A. Vrooman, Marius de Groot
, Aad van der Lugt, Mohammad Arfan Ikram
, Meike W. Vernooij
, Monique M. B. Breteler
, Wiro J. Niessen
:
Statistical analysis of minimum cost path based structural brain connectivity. NeuroImage 55(2): 557-565 (2011) - [j4]Michiel Schaap, Theo van Walsum
, Lisan Neefjes, Coert Metz, Ermanno Capuano, Marleen de Bruijne
, Wiro J. Niessen
:
Robust Shape Regression for Supervised Vessel Segmentation and its Application to Coronary Segmentation in CTA. IEEE Trans. Medical Imaging 30(11): 1974-1986 (2011) - [c15]Coert Metz, Michiel Schaap, Stefan Klein, Peter R. Rijnbeek, Lisan Neefjes, Nico Mollet, Carl J. Schultz
, Patrick W. Serruys, Wiro J. Niessen
, Theo van Walsum:
Alignment of 4D Coronary CTA with Monoplane X-ray Angiography. AE-CAI 2011: 106-116 - [c14]Nora Baka, Coert Metz, Michiel Schaap, Boudewijn P. F. Lelieveldt
, Wiro J. Niessen
, Marleen de Bruijne
:
Comparison of Shape Regression Methods under Landmark Position Uncertainty. MICCAI (2) 2011: 434-441 - [c13]Hui Tang, Theo van Walsum, Robbert S. van Onkelen, Stefan Klein, Reinhard Hameeteman, Michiel Schaap, Quirijn J. A. van den Bouwhuijsen, Jacqueline C. M. Witteman, Aad van der Lugt, Lucas J. van Vliet
, Wiro J. Niessen
:
Multispectral MRI centerline tracking in carotid arteries. Medical Imaging: Image Processing 2011: 79621N - 2010
- [j3]Rashindra Manniesing
, Michiel Schaap, Sietske Rozie, Reinhard Hameeteman, Danijela Vukadinovic, Aad van der Lugt, Wiro J. Niessen
:
Robust CTA lumen segmentation of the atherosclerotic carotid artery bifurcation in a large patient population. Medical Image Anal. 14(6): 759-769 (2010) - [c12]Rahil Khurram Shahzad, Michiel Schaap, Theo van Walsum, Stefan Klein, Annick C. Weustink, Lucas J. van Vliet
, Wiro J. Niessen
:
A patient-specific coronary density estimate. ISBI 2010: 9-12 - [c11]Hui Tang, Robbert S. van Onkelen, Theo van Walsum
, Reinhard Hameeteman, Michiel Schaap, Fufa L. Tori, Quirijn J. A. van den Bouwhuijsen, Jacqueline C. M. Witteman, Aad van der Lugt, Lucas J. van Vliet
:
A Semi-automatic Method for Segmentation of the Carotid Bifurcation and Bifurcation Angle Quantification on Black Blood MRA. MICCAI (3) 2010: 97-104 - [c10]Renske de Boer, Michiel Schaap, Fedde van der Lijn, Henri A. Vrooman, Marius de Groot
, Meike W. Vernooij
, Mohammad Arfan Ikram, Evert F. S. van Velsen, Aad van der Lugt, Monique M. B. Breteler
:
Statistical Analysis of Structural Brain Connectivity. MICCAI (2) 2010: 101-108 - [c9]Coert Metz, Nora Baka, Hortense A. Kirisli, Michiel Schaap, Theo van Walsum
, Stefan Klein
, Lisan Neefjes, Nico Mollet, Boudewijn P. F. Lelieveldt
, Marleen de Bruijne
:
Conditional Shape Models for Cardiac Motion Estimation. MICCAI (1) 2010: 452-459 - [c8]Hortense A. Kirisli, Michiel Schaap, Stefan Klein, Lisan Neefjes, Annick C. Weustink, Theo van Walsum, Wiro J. Niessen
:
Fully automatic cardiac segmentation from 3D CTA data: a multi-atlas based approach. Medical Imaging: Image Processing 2010: 762305
2000 – 2009
- 2009
- [j2]Michiel Schaap, Coert Metz, Theo van Walsum
, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Christian Bauer, Hrvoje Bogunovic
, Carlos Castro-Gonzalez
, Xiang Deng, Engin Dikici, Thomas O'Donnell, Michel Frenay, Ola Friman, Marcela Hernández Hoyos, Pieter H. Kitslaar, Karl Krissian, Caroline Kühnel, Miguel A. Luengo-Oroz
, Maciej Orkisz
, Örjan Smedby
, Martin Styner
, Andrzej Szymczak, Hüseyin Tek, Chunliang Wang, Simon K. Warfield
, Sebastian Zambal, Yong Zhang, Gabriel P. Krestin, Wiro J. Niessen
:
Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms. Medical Image Anal. 13(5): 701-714 (2009) - [c7]Michiel Schaap, Lisan Neefjes, Coert Metz, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Jolanda Wentzel, Theo van Walsum
, Wiro J. Niessen
:
Coronary Lumen Segmentation Using Graph Cuts and Robust Kernel Regression. IPMI 2009: 528-539 - [c6]Coert Metz, Michiel Schaap, Stefan Klein, Annick C. Weustink, Nico Mollet, Carl J. Schultz
, Robert Jan van Geuns, Patrick W. Serruys, Theo van Walsum, Wiro J. Niessen
:
GPU Accelerated Alignment of 3-D CTA with 2-D X-Ray Data for Improved Guidance in Coronary Interventions. ISBI 2009: 959-962 - [c5]Coert Metz, Michiel Schaap, Stefan Klein
, Lisan Neefjes, Ermanno Capuano, Carl J. Schultz
, Robert Jan van Geuns, Patrick W. Serruys, Theo van Walsum
, Wiro J. Niessen
:
Patient Specific 4D Coronary Models from ECG-gated CTA Data for Intra-operative Dynamic Alignment of CTA with X-ray Images. MICCAI (1) 2009: 369-376 - 2008
- [j1]Michiel Schaap, Arnold M. R. Schilham, Karel J. Zuiderveld, Mathias Prokop
, Evert-Jan Vonken, Wiro J. Niessen
:
Fast Noise Reduction in Computed Tomography for Improved 3-D Visualization. IEEE Trans. Medical Imaging 27(8): 1120-1129 (2008) - [c4]Theo van Walsum
, Michiel Schaap, Coert Metz, Alina G. van der Giessen, Wiro J. Niessen
:
Averaging Centerlines: Mean Shift on Paths. MICCAI (1) 2008: 900-907 - 2007
- [c3]Michiel Schaap, Ihor Smal, Coert Metz, Theo van Walsum, Wiro J. Niessen:
Bayesian Tracking of Elongated Structures in 3D Images. IPMI 2007: 74-85 - [c2]Coert Metz, Michiel Schaap, Alina G. van der Giessen, Theo van Walsum, Wiro J. Niessen
:
Semi-Automatic Coronary Artery Centerline Extraction in Computed Tomography Angiography Data. ISBI 2007: 856-859 - [c1]Michiel Schaap, Rashindra Manniesing
, Ihor Smal, Theo van Walsum, Aad van der Lugt, Wiro J. Niessen:
Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA. MICCAI (2) 2007: 562-570
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