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2020 – today
- 2023
[j13]Luke T. Slater
, John A. Williams, Paul N. Schofield, Sophie Russell, Samantha C. Pendleton, Andreas Karwath, Hilary Fanning, Simon Ball, Robert Hoehndorf, Georgios V. Gkoutos:
Klarigi: Characteristic explanations for semantic biomedical data. Comput. Biol. Medicine 153: 106425 (2023)- 2022
- [j12]Luke T. Slater, Sophie Russell, Silver Makepeace, Alexander Carberry, Andreas Karwath, John A. Williams, Hilary Fanning, Simon Ball, Robert Hoehndorf, Georgios V. Gkoutos:
Evaluating semantic similarity methods for comparison of text-derived phenotype profiles. BMC Medical Informatics Decis. Mak. 22(1): 33 (2022) - [j11]Honghan Wu, Minhong Wang, Jinge Wu, Farah Francis, Yun-Hsuan Chang, Alex Shavick, Hang Dong, Michael Tin Chung Poon, Natalie K. Fitzpatrick, Adam P. Levine, Luke T. Slater, Alex Handy, Andreas Karwath, Georgios V. Gkoutos, Claude Chelala, Anoop D. Shah, Robert Stewart, Nigel Collier, Beatrice Alex, William Whiteley, Cathie Sudlow, Angus Roberts, Richard J. B. Dobson:
A survey on clinical natural language processing in the United Kingdom from 2007 to 2022. npj Digit. Medicine 5 (2022) - 2021
- [j10]Luke T. Slater, William Bradlow, Simon Ball, Robert Hoehndorf, Georgios V. Gkoutos:
Improved characterisation of clinical text through ontology-based vocabulary expansion. J. Biomed. Semant. 12(1): 7 (2021) - [j9]Luke T. Slater, William Bradlow, Dino FA. Motti, Robert Hoehndorf, Simon Ball, Georgios V. Gkoutos:
A fast, accurate, and generalisable heuristic-based negation detection algorithm for clinical text. Comput. Biol. Medicine 130: 104216 (2021) - [j8]Luke T. Slater, Andreas Karwath, John A. Williams, Sophie Russell, Silver Makepeace, Alexander Carberry, Robert Hoehndorf, Georgios V. Gkoutos:
Towards similarity-based differential diagnostics for common diseases. Comput. Biol. Medicine 133: 104360 (2021) - [j7]Samantha C. Pendleton, Luke T. Slater, Andreas Karwath, Rose M. Gilbert, Nicola Davis, Konrad Pesudovs, Xiaoxuan Liu, Alastair K. Denniston, Georgios V. Gkoutos, Tasanee Braithwaite:
Development and application of the ocular immune-mediated inflammatory diseases ontology enhanced with synonyms from online patient support forum conversation. Comput. Biol. Medicine 135: 104542 (2021) - [j6]Luke T. Slater, John A. Williams, Andreas Karwath, Hilary Fanning, Simon Ball, Paul N. Schofield, Robert Hoehndorf, Georgios V. Gkoutos:
Multi-faceted semantic clustering with text-derived phenotypes. Comput. Biol. Medicine 138: 104904 (2021) - [j5]Luke T. Slater, Andreas Karwath, Robert Hoehndorf, Georgios V. Gkoutos:
Effects of Negation and Uncertainty Stratification on Text-Derived Patient Profile Similarity. Frontiers Digit. Health 3: 781227 (2021) - [c8]Luke T. Slater, John A. Williams, Paul N. Schofield, Georgios V. Gkoutos:
Exploring Sentiment as a Potential Indicator of Bias in Disease Ontologies. BIBM 2021: 1826-1834 - 2020
- [j4]Fernando Javier Martínez Santiago, Rosario García-Viedma, John A. Williams, Luke T. Slater, Georgios V. Gkoutos:
Aging Neuro-Behavior Ontology. Appl. Ontology 15(2): 219-239 (2020) - [j3]Luke T. Slater, Georgios V. Gkoutos, Robert Hoehndorf:
Towards semantic interoperability: finding and repairing hidden contradictions in biomedical ontologies. BMC Medical Informatics Decis. Mak. 20-S(10): 311 (2020)
2010 – 2019
- 2016
- [j2]Luke T. Slater, Georgios V. Gkoutos, Paul N. Schofield, Robert Hoehndorf:
Using AberOWL for fast and scalable reasoning over BioPortal ontologies. J. Biomed. Semant. 7: 49 (2016) - [c7]Miguel Ángel Rodríguez-García, Luke T. Slater, Imane Boudellioua, Paul N. Schofield, Georgios V. Gkoutos, Robert Hoehndorf:
Updates to the AberOWL Ontology Repository. ICBO/BioCreative 2016 - [c6]Luke T. Slater, Georgios V. Gkoutos, Paul N. Schofield, Robert Hoehndorf:
To MIREOT or not to MIREOT? A Case Study of the Impact of Using MIREOT in the Experimental Factor Ontology (EFO). ICBO/BioCreative 2016 - 2015
- [j1]Robert Hoehndorf, Luke T. Slater, Paul N. Schofield, Georgios V. Gkoutos:
Aber-OWL: a framework for ontology-based data access in biology. BMC Bioinform. 16: 26:1-26:9 (2015) - [c5]Luke T. Slater, Georgios V. Gkoutos, Paul N. Schofield, Robert Hoehndorf:
Using Aber-OWL for fast and scalable reasoning over BioPortal ontologies. ICBO 2015 - [c4]Luke T. Slater, Georgios V. Gkoutos, Paul N. Schofield, Robert Hoehndorf:
AberOWL: an ontology portal with OWL EL reasoning. ICBO 2015 - [c3]Luke T. Slater, Miguel Ángel Rodríguez-García, Keiron O'Shea, Paul N. Schofield, Georgios V. Gkoutos, Robert Hoehndorf:
Experiences with Aber-OWL, an Ontology Repository with OWL EL Reasoning. OWLED 2015: 81-86 - [c2]Miguel Ángel Rodríguez-García, Luke T. Slater, Keiron O'Shea, Paul N. Schofield, Georgios V. Gkoutos, Robert Hoehndorf:
Visualising Ontologies with AberOWL. SWAT4LS 2015: 183-192 - 2014
- [c1]Robert Hoehndorf, Luke T. Slater, Paul N. Schofield, Georgios V. Gkoutos:
Aber-OWL: A Framework for Ontology-based Data Access in Biology. SWAT4LS 2014 - [i1]Robert Hoehndorf, Luke T. Slater, Paul N. Schofield, Georgios V. Gkoutos:
Aber-OWL: a framework for ontology-based data access in biology. CoRR abs/1407.6812 (2014)
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