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ORCIDDigital Pathology 2018: Houston, Texas, USA
- John Tomaszewski, Metin N. Gurcan:
Medical Imaging 2018: Digital Pathology, Houston, Texas, United States, 10-15 February 2018. SPIE Proceedings 10581, SPIE 2018, ISBN 9781510616516
Keynote and Emerging Trends
- Çaglar Senaras
, Berkman Sahiner, Gary Tozbikian, Gerard Lozanski, Metin N. Gurcan:
Creating synthetic digital slides using conditional generative adversarial networks: application to Ki67 staining. 1058103 - Yao Nie, Maria V. Sainz de Cea:
Single stain normalization for IHC whole slide images. 1058104
Machine Learning Trends
- Erik A. Burlingame, Adam A. Margolin, Joe W. Gray, Young Hwan Chang:
SHIFT: speedy histopathological-to-immunofluorescent translation of whole slide images using conditional generative adversarial networks. 1058105 - Çaglar Senaras, Michael Pennell, Weijie Chen, Berkman Sahiner, Arwa Shana'ah, Abner Louissaint, Robert Paul Hasserjian, Gerard Lozanski, Metin Nafi Gürcan:
Tumor microenvironment for follicular lymphoma: structural analysis for outcome prediction. 1058106 - Pushpak Pati, Sonali Andani, Matthew Pediaditis, Matheus Palhares Viana, Jan Hendrik Rüschoff, Peter Wild, Maria Gabrani:
Deep positive-unlabeled learning for region of interest localization in breast tissue images. 1058107 - M. Khalid Khan Niazi, Gillian Beamer, Metin N. Gurcan:
An application of transfer learning to neutrophil cluster detection for tuberculosis: efficient implementation with nonmetric multidimensional scaling and sampling. 1058108 - Ryan Therrien, Scott Doyle:
Role of training data variability on classifier performance and generalizability. 1058109
Diagnosis, Prognosis, and Predictive Analysis
- Brandon G. Ginley, John Tomaszewski, Kuang-Yu Jen, Agnes B. Fogo, Sanjay Jain, Pinaki Sarder:
Computational analysis of the structural progression of human glomeruli in diabetic nephropathy. 105810A - Olivier Simon, Rabi Yacoub, Sanjay Jain, John Tomaszewski, Pinaki Sarder:
Examining structural changes in diabetic nephropathy using inter-nuclear distances in glomeruli: a comparison of variously automated methods. 105810B - Brendon Lutnick, Rabi Yacoub, Kuang-Yu Jen, John Tomaszewski, Sanjay Jain, Pinaki Sarder:
Deep variational auto-encoders for unsupervised glomerular classification. 105810C - Patrick Leo, Eswar Shankar, Robin Elliott, Andrew Janowczyk, Anant Madabhushi, Sanjay Gupta:
Combination of nuclear NF-κB/p65 localization and gland morphological features from surgical specimens appears to be predictive of early biochemical recurrence in prostate cancer patients. 105810D - Najah M. Alsubaie, Korsuk Sirinukunwattana, Shan E Ahmed Raza, David R. J. Snead, Nasir M. Rajpoot:
A bottom-up approach for tumour differentiation in whole slide images of lung adenocarcinoma. 105810E - Krati Gupta, Arnav Bhavsar, Anil Kumar Sao:
Mitotic cells detection for HEp-2 specimen images using threshold-based evaluation scheme. 105810F
Detection and Segmentation
- Anna Maria Tsakiroglou, Sophie Fitzpatrick, Lilli Nelson, Catharine M. West, Kim Linton, Kang Zeng, Garry Ashton, Sue Astley, Richard Byers, Martin Fergie:
Quantifying cell-type interactions and their spatial patterns as prognostic biomarkers in follicular lymphoma. 105810G - M. Khalid Khan Niazi, Thomas E. Tavolara, Vidya Arole, Anil V. Parwani, Cheryl Lee, Metin N. Gurcan:
Automated T1 bladder risk stratification based on depth of lamina propria invasion from H and E tissue biopsies: a deep learning approach. 105810H - Farhad Ghazvinian Zanjani, Svitlana Zinger, Peter H. N. de With:
Cancer detection in histopathology whole-slide images using conditional random fields on deep embedded spaces. 105810I - Auranuch Lorsakul, Jörg Bredno, Robert L. Ochs, Larry Morrison, William Day:
Validation of multiplex immunohistochemistry assays using automated image analysis. 105810J - Yao Nie, Christian Roessler, Emilia Andersson, Oliver Grimm:
Color deconvolution method with DAB scatter correction for bright field image analysis. 105810K - Daan J. Geijs, Milad Intezar, Jeroen A. W. M. van der Laak, Geert J. S. Litjens:
Automatic color unmixing of IHC stained whole slide images. 105810L
Precision Medicine and Grading
- Pranjal Vaidya, Xiangxue Wang, Kaustav Bera, Arjun Khunger, Humberto Choi, Pradnya Patil, Vamsidhar Velcheti, Anant Madabhushi:
RaPtomics: integrating radiomic and pathomic features for predicting recurrence in early stage lung cancer. 105810M - Martin T. Halicek, James V. Little, Xu Wang, Zhuo Georgia Chen, Mihir Patel, Christopher C. Griffith, Mark W. El-Deiry, Nabil F. Saba, Amy Y. Chen, Baowei Fei:
Deformable registration of histological cancer margins to gross hyperspectral images using demons. 105810N - Rene Bidart, Mehrdad J. Gangeh, Mohammad Peikari, Sherine Salama, Sharon Nofech-Mozes, Anne L. Martel, Ali Ghodsi:
Localization and classification of cell nuclei in post-neoadjuvant breast cancer surgical specimen using fully convolutional networks. 105810O - Nicolas Brieu, Christos G. Gavriel, David J. Harrison, Peter D. Caie, Günter Schmidt:
Context-based interpolation of coarse deep learning prediction maps for the segmentation of fine structures in immunofluorescence images. 105810P - Wenchao Han, Carol Johnson, Mena Gaed, José A. Gómez, Madeleine Moussa, Joseph L. Chin, Stephen E. Pautler, Glenn Bauman, Aaron D. Ward:
Automatic cancer detection and localization on prostatectomy histopathology images. 105810Q
Poster Session
- Germán Corredor, Xiangxue Wang, Cheng Lu, Vamsidhar Velcheti, Eduardo Romero, Anant Madabhushi:
A watershed and feature-based approach for automated detection of lymphocytes on lung cancer images. 105810R - Wouter Bulten, Christina A. Hulsbergen van de Kaa, Jeroen van der Laak, Geert J. S. Litjens:
Automated segmentation of epithelial tissue in prostatectomy slides using deep learning. 105810S - Shazia Akbar, Mohammad Peikari, Sherine Salama, Sharon Nofech-Mozes, Anne L. Martel:
Determining tumor cellularity in digital slides using ResNet. 105810U - Sean A. K. Pentinga, Keith Kwan, Sarah A. Mattonen, Carol Johnson, Alexander V. Louie, Mark Landis, Richard Inculet, Richard Malthaner, Dalilah Fortin, George Rodrigues, Brian Yaremko, David A. Palma, Aaron D. Ward:
3D human lung histology reconstruction and registration to in vivo imaging. 105810V - Srishti Gautam, Arnav Bhavsar, Anil Kumar Sao, Harinarayan K. K.:
CNN based segmentation of nuclei in PAP-smear images with selective pre-processing. 105810X - Mikaël Rousson, Martin Hedlund, Mats Andersson, Ludwig Jacobsson, Gunnar Läthén, Björn Norell, Oscar Alfonso Jiménez del Toro, Henning Müller, Manfredo Atzori:
Tumor proliferation assessment of whole slide images. 105810Y - David Tellez, Maschenka Balkenhol, Nico Karssemeijer, Geert Litjens, Jeroen van der Laak, Francesco Ciompi:
H&E stain augmentation improves generalization of convolutional networks for histopathological mitosis detection. 105810Z - Adam R. Sibley, Maryellen L. Giger, Vladimir Liarski, Marcus R. Clark:
Simultaneous segmentation and classification of multichannel immuno-fluorescently labeled confocal microscopy images using deep convolutional neural networks. 1058110 - Takayasu Moriya, Holger R. Roth, Shota Nakamura, Hirohisa Oda, Kai Nagara, Masahiro Oda, Kensaku Mori:
Unsupervised pathology image segmentation using representation learning with spherical k-means. 1058111 - Thomas de Bel, Meyke Hermsen, Bart Smeets, Luuk Hilbrands, Jeroen van der Laak, Geert Litjens:
Automatic segmentation of histopathological slides of renal tissue using deep learning. 1058112 - Daniel E. Lopez Barron, Dig Vijay Kumar Yarlagadda, Praveen Rao, Ossama Tawfik, Deepthi S. Rao:
Scalable storage of whole slide images and fast retrieval of tiles using Apache Spark. 1058113 - Darshana Govind, Brandon Ginley, Brendon Lutnick, John Tomaszewski, Pinaki Sarder:
Glomerular detection and segmentation from multimodal microscopy images using a Butterworth band-pass filter. 1058114 - Yue Du, Roy Zhang, Abolfazl Zargari, Theresa C. Thai, Camille C. Gunderson, Katherine M. Moxley, Hong Liu, Bin Zheng, Yuchen Qiu:
A performance comparison of low- and high-level features learned by deep convolutional neural networks in epithelium and stroma classification. 1058116 - Gautham Nandakumar, Shantel Maharaj, David E. Breen, Fernando U. Garcia, Mark D. Zarella:
Image processing to extend effective OCT penetration depth in tissue. 1058117 - Qi Gong, Benjamin P. Berman, Marios A. Gavrielides, Brandon D. Gallas:
Registration accuracy between whole slide images and glass slides in eeDAP workflow. 1058118 - Simon Graham, Muhammad Shaban, Talha Qaiser, Syed Ali Khurram, Nasir M. Rajpoot:
Classification of lung cancer histology images using patch-level summary statistics. 1058119 - Pawel Kleczek, Martyna Lech, Joanna Jaworek-Korjakowska, Grzegorz Dyduch, Ryszard Tadeusiewicz:
Segmentation of black ink and melanin in skin histopathological images. 105811A - Nathan Ing, Zhaoxuan Ma, Jiayun Li, Hootan Salemi, Corey W. Arnold, Beatrice S. Knudsen, Arkadiusz Gertych:
Semantic segmentation for prostate cancer grading by convolutional neural networks. 105811B - Brendan Crabb, Niels Olson:
SlideSeg: a Python module for the creation of annotated image repositories from whole slide images. 105811C - Chang Shu, Xi Chen, Qiwei Xie, Hua Han:
An unsupervised network for fast microscopic image registration. 105811D - Naoki Kawamura, Hirokazu Kobayashi, Tatsuya Yokota, Hidekata Hontani, Chika Iwamoto, Kenoki Ohuchida, Makoto Hashizume:
Landmark-based reconstruction of 3D smooth structures from serial histological sections. 105811E - Golnaz Moallem, Hamed Sari-Sarraf, Mahdieh Poostchi, Richard James Maude, Kamolrat Silamut, Md Amir Hossain, Sameer K. Antani, Stefan Jaeger, George R. Thoma:
Detecting and segmenting overlapping red blood cells in microscopic images of thin blood smears. 105811F
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