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GSDS 2.0: an upgraded gene feature visualization server

Bioinformatics. 2015 Apr 15;31(8):1296-7. doi: 10.1093/bioinformatics/btu817. Epub 2014 Dec 10.

Abstract

: Visualizing genes' structure and annotated features helps biologists to investigate their function and evolution intuitively. The Gene Structure Display Server (GSDS) has been widely used by more than 60 000 users since its first publication in 2007. Here, we reported the upgraded GSDS 2.0 with a newly designed interface, supports for more types of annotation features and formats, as well as an integrated visual editor for editing the generated figure. Moreover, a user-specified phylogenetic tree can be added to facilitate further evolutionary analysis. The full source code is also available for downloading.

Availability and implementation: Web server and source code are freely available at http://gsds.cbi.pku.edu.cn.

Contact: gaog@mail.cbi.pku.edu.cn or gsds@mail.cbi.pku.edu.cn

Supplementary information: Supplementary data are available at Bioinformatics online.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Genes / genetics*
  • Genomics / methods*
  • Humans
  • Internet
  • Molecular Sequence Annotation / methods*
  • Phylogeny
  • Software*
  • User-Computer Interface