UCSC Genome Browser Home

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WARNING: This is the UCSC Genome Browser development site. This website is used for testing purposes only and is not intended for general public use. Data and tools on this site are under development, have not been reviewed for quality, and are subject to change at any time. The high-quality, reviewed public site of the UCSC Genome Browser is available for use at http://genome.ucsc.edu/.

Tools

hg38

hg19

mm39

Genome Browser - Interactively visualize genomic data
BLAT - Rapidly align sequences to the genome
In-Silico PCR - Rapidly align PCR primer pairs to the genome
Table Browser - Download and filter data from the Genome Browser
LiftOver - Convert genome coordinates between assemblies
REST API - Returns data requested in JSON format
Variant Annotation Integrator - Annotate genomic variants
More tools...

News

Sept. 10, 2024 - Two new public hubs: ENIGMA VCEP and BRCAExchange

Aug. 29, 2024 - Download track data in view

Aug. 21, 2024 - New groups feature for track hubs

Aug. 14, 2024 - New pop-up dialogue box for item details

Aug. 12, 2024 - Illumina SpliceAI tracks for human (hg38 and hg19)

Jul. 31, 2024 - GENCODE "KnownGene" v45lift37 release for human (hg19)

Jul. 25, 2024 - EVA SNP release 6 for 37 assemblies

Meetings and Workshops: Come see us in person!

University of Pennsylvania School of Veterinary Science -- Philadelphia, PA. September 19, 2024

Variant Effect Prediction Training Course (VEPTC) -- Palermo, Italy. October 14-16, 2024

American Society of Human Genetics (ASHG) -- Denver, CO. November 5, 2024

Plant and Animal Genome Conference (PAG32) -- San Diego, CA. January 10-15, 2025.

Feel free to contact us if you are interested in attending a workshop, or meeting someone from the team to collaborate, get help, or ask any questions at the meetings.

Sharing data

Click the images to explore the latest Public Sessions on our main site.

Sessions - Configure, save, and share short links to Genome Browser views
Track Hubs - A powerful tool for displaying your own or viewing other data annotations
Custom Tracks - A simple way to display some custom annotations

Learning

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Training - Visit our training page for videos, manuals, and tutorials on the Genome Browser
Education - We offer teaching modules using the Genome Browser aimed at the undergraduate classroom
Workshops - If you would like to request a virtual or in-person workshop, please contact us